C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074818 Pdzd7 10090 - 19:45026906-45046614 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038901 Pdzd7-002 45026906-45030015 processed_transcript
  ENSMUST00000145391 Pdzd7-001 45026907-45046614 protein_coding
  ENSMUST00000169459 Pdzd7-201 45026907-45045772 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryENSMUST00000038901ENSMUST00000145391
Transcript ID Brain Muscle Ovary
ENSMUST00000038901 N/A 3.021±0.09 6.691±0.00
ENSMUST00000145391 2.337±0.00 2.382±0.21 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0002 VISTA 19:44496521-45098014
CIL_0007U1 CIL_0007U1_0002 VISTA 19:44501251-45102539
CIL_000940 CIL_000940_0002 VISTA 19:44925545-45526320
CIL_0005ND CIL_0005ND_0002 CGP 19:45006558-45027104
CIL_0001C9 CIL_0001C9_0003 CGP 19:45015176-45046614
CIL_0005NG CIL_0005NG_0002 CGP 19:45026906-45056383

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005929 IEA cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076974 pdzd7a PDZ domain containing 7a protein_coding Danio_rerio
ENSDARG00000090631 PDZD7 (2 of 2) PDZ domain containing 7 protein_coding Danio_rerio
ENSG00000186862 PDZD7 PDZ domain containing 7 protein_coding Homo_sapiens

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