C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, beta 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039380 Gjb6-001 ENSMUSG00000040055 10090 - 14:57123303-57133611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039380
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039380 0.549±0.01 17.170±1.29 1.234±0.12 0.042±0.02 0.015±0.00 0.305±0.01 0.020±0.02 2.904±0.20 0.050±0.03 0.088±0.00 0.260±0.11 0.077±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SL CIL_0003SL_0002 CGP 14:57123303-57398483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 IEA cytosol
GO:0005921 IDA gap junction
GO:0005922 IEA connexon complex
GO:0006915 IEA apoptotic process
GO:0007154 IEA cell communication
GO:0007568 IEA aging
GO:0007605 IMP sensory perception of sound
GO:0008285 IEA negative regulation of cell proliferation
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0032496 IEA response to lipopolysaccharide
GO:0042471 IMP ear morphogenesis
GO:0048839 IEA inner ear development
GO:0051602 IEA response to electrical stimulus
GO:0071333 IEA cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241124 GJB6-001 protein_coding Homo_sapiens 0 1083
ENST00000356192 GJB6-004 protein_coding Homo_sapiens 0 1083
ENST00000400065 GJB6-002 protein_coding Homo_sapiens 0 1083
ENST00000400066 GJB6-003 protein_coding Homo_sapiens 0 1083

Loading