C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kruppel-like factor 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039545 Klf8-001 ENSMUSG00000041649 10090 + X:153359613-153395797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039545 0.211±0.04 0.156±0.06 0.312±0.09 0.756±0.26 0.239±0.12 0.253±0.12 0.117±0.01 0.151±0.01 0.086±0.05 0.600±0.31 0.067±0.03 0.909±0.53 3.267±2.10 0.128±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LJ CIL_0006LJ_0002 CGP X:153139981-153396132
CIL_00057D CIL_00057D_0002 CGP X:153237466-153501570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358094 KLF8-002 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000374928 KLF8-201 protein_coding Homo_sapiens 0 451
ENST00000462627 KLF8-004 retained_intron Homo_sapiens 0 769
ENST00000468660 KLF8-001 protein_coding Homo_sapiens 0 1315
ENST00000566880 KLF8P1-001 processed_pseudogene Homo_sapiens 0 784

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