C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006LJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000083750-ENSG00000102349 CGP 9606 X:55717739-56287889
GeneTranscriptPositionBiotype
ENSG00000083750 (RRAGB)
Ras-related GTP binding B 		ENST00000262850 (RRAGB-001) 55717885-55758348 protein_coding
ENST00000374941 (RRAGB-002) 55717739-55758774 protein_coding
ENST00000414239 (RRAGB-005) 55717749-55753475 protein_coding
ENST00000474757 (RRAGB-003) 55731401-55751623 processed_transcript
ENST00000475061 (RRAGB-006) 55755810-55758382 processed_transcript
ENST00000498762 (RRAGB-004) 55722191-55731708 processed_transcript
ENSG00000102349 (KLF8)
Kruppel-like factor 8 		ENST00000358094 (KLF8-002) 56233189-56285097 nonsense_mediated_decay
ENST00000374928 (KLF8-201) 56232437-56287889 protein_coding
ENST00000462627 (KLF8-004) 56232474-56287884 retained_intron
ENST00000468660 (KLF8-001) 56233047-56284669 protein_coding
ENST00000476898 (KLF8-003) 56232421-56269208 retained_intron
ENST00000624085 (KLF8-202) 56233212-56284655 protein_coding
ENSG00000214745 (RP11-54I5.1)
 ENST00000398901 (RP11-54I5.1-001) 55961208-55962482 processed_pseudogene
ENSG00000227486 (RP13-188A5.1)
 ENST00000452532 (RP13-188A5.1-001) 55908123-56015173 lincRNA
ENSG00000234135 (RPL23AP83)
ribosomal protein L23a pseudogene 83 		ENST00000434984 (RPL23AP83-001) 56242937-56243409 processed_pseudogene
CIL_0006LJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041658-ENSMUSG00000041649 CGP 10090 X:153139981-153396132
GeneTranscriptPositionBiotype
ENSMUSG00000041649 (Klf8)
Kruppel-like factor 8 		ENSMUST00000039545 (Klf8-001) 153359613-153395797 protein_coding
ENSMUST00000112574 (Klf8-002) 153237748-153396132 protein_coding
ENSMUST00000143880 (Klf8-003) 153237466-153370903 protein_coding
ENSMUSG00000041658 (Rragb)
Ras-related GTP binding B 		ENSMUST00000039720 (Rragb-001) 153139981-153171943 protein_coding
ENSMUST00000144175 (Rragb-002) 153139987-153153187 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LJ_0001ENSG00000083750ENST00000262850ENST00000374941ENST00000414239ENST00000474757ENST00000475061ENST00000498762ENSG00000102349ENST00000358094ENST00000374928ENST00000462627ENST00000468660ENST00000476898ENST00000624085ENSG00000214745ENST00000398901ENSG00000227486ENST00000452532ENSG00000234135ENST00000434984CIL_0006LJ_0002ENSMUSG00000041649ENSMUST00000039545ENSMUST00000112574ENSMUST00000143880ENSMUSG00000041658ENSMUST00000039720ENSMUST00000144175
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LJ_0001ENSG00000083750ENST00000262850ENST00000374941ENST00000414239ENST00000474757ENST00000475061ENST00000498762ENSG00000102349ENST00000358094ENST00000374928ENST00000462627ENST00000468660ENST00000476898ENST00000624085ENSG00000214745ENST00000398901ENSG00000227486ENST00000452532ENSG00000234135ENST00000434984CIL_0006LJ_0002ENSMUSG00000041649ENSMUST00000039545ENSMUST00000112574ENSMUST00000143880ENSMUSG00000041658ENSMUST00000039720ENSMUST00000144175
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083750 ENST00000262850 0.650±0.00 N/A N/A 5.120±2.08 N/A N/A 0.639±0.49 1.886±0.00 0.566±0.34 N/A 0.837±0.00 0.565±0.00 0.705±0.29 N/A
ENST00000374941 1.870±0.00 2.831±0.00 N/A 4.313±2.18 2.497±0.00 2.839±2.39 1.804±0.00 1.275±0.99 0.790±0.00 2.458±0.00 0.829±0.70 5.199±4.47 3.097±0.53 3.924±0.87
ENST00000414239 1.584±0.00 3.318±0.00 N/A N/A N/A 2.104±0.00 N/A N/A N/A 3.352±0.00 N/A 3.306±0.52 4.864±0.00 4.583±0.83
ENST00000474757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A N/A N/A
ENST00000475061 N/A N/A N/A N/A N/A N/A N/A N/A 1.694±0.00 N/A 1.512±0.00 N/A N/A N/A
ENST00000498762 N/A N/A N/A N/A 4.157±0.00 N/A N/A 2.495±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000102349 ENST00000358094 N/A N/A N/A N/A N/A N/A N/A 1.477±0.00 N/A 1.091±0.00 0.094±0.00 N/A N/A N/A
ENST00000374928 N/A N/A 1.235±0.00 0.444±0.00 0.684±0.00 N/A 0.154±0.00 0.327±0.13 N/A 1.388±0.00 N/A 0.673±0.10 0.622±0.00 0.599±0.00
ENST00000462627 0.285±0.00 0.154±0.00 N/A 0.047±0.00 0.394±0.00 0.716±0.00 0.171±0.12 N/A 0.876±0.00 0.753±0.00 N/A N/A N/A 0.220±0.00
ENST00000468660 N/A N/A N/A N/A 2.748±0.00 N/A N/A N/A N/A N/A 0.586±0.00 N/A 0.915±0.00 N/A
ENST00000476898 N/A N/A N/A N/A N/A 0.357±0.00 0.065±0.00 N/A 0.025±0.00 N/A 0.155±0.00 0.089±0.00 N/A N/A
ENST00000624085 N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000214745 ENST00000398901 N/A N/A 0.038±0.00 0.066±0.00 0.094±0.00 0.028±0.00 0.047±0.00 N/A 0.062±0.01 N/A 0.036±0.00 0.139±0.11 0.094±0.00 0.147±0.00
ENSG00000227486 ENST00000452532 1.186±0.00 1.019±0.00 0.572±0.00 0.481±0.08 0.382±0.04 0.253±0.00 0.114±0.00 0.363±0.00 0.190±0.04 1.219±0.33 N/A 0.471±0.28 0.347±0.17 0.662±0.00
ENSG00000234135 ENST00000434984 0.033±0.00 N/A N/A N/A 0.110±0.00 0.034±0.00 0.031±0.00 0.224±0.19 N/A N/A 0.031±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041649 ENSMUST00000039545 0.211±0.04 0.156±0.06 0.312±0.09 0.756±0.26 0.239±0.12 0.253±0.12 0.117±0.01 0.151±0.01 0.086±0.05 0.600±0.31 0.067±0.03 0.909±0.53 3.267±2.10 0.128±0.02
ENSMUST00000112574 0.590±0.38 0.214±0.07 0.202±0.04 0.718±0.45 0.378±0.15 0.327±0.11 0.100±0.00 0.095±0.04 0.074±0.03 0.556±0.41 0.025±0.00 1.305±0.97 0.433±0.01 0.178±0.13
ENSMUST00000143880 N/A N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A 0.470±0.00 N/A N/A N/A
ENSMUSG00000041658 ENSMUST00000039720 0.230±0.21 0.721±0.26 0.867±0.43 17.473±2.41 0.445±0.09 0.389±0.20 N/A 0.245±0.07 0.304±0.23 0.290±0.00 N/A 1.488±0.60 0.238±0.21 1.868±0.73
ENSMUST00000144175 0.779±0.58 1.630±0.88 N/A 27.179±0.00 0.569±0.25 0.714±0.29 0.635±0.21 1.094±0.42 0.153±0.12 1.274±0.28 0.538±0.01 1.756±0.76 0.308±0.09 2.248±0.70

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