C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUZ RNA binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039939 Szrd1-003 ENSMUSG00000040842 10090 - 4:141113001-141139775 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000039939
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000039939 3.192±0.04 7.333±2.27 1.690±0.00 4.588±2.16 6.094±0.37 1.883±0.21 4.445±0.89 3.849±1.27 5.166±1.55 4.343±0.00 6.601±1.69 3.952±2.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000401088 SZRD1-001 protein_coding Homo_sapiens 0 1406
ENST00000401089 SZRD1-005 protein_coding Homo_sapiens 0 1535
ENST00000466212 SPATA21-003 processed_transcript Homo_sapiens 0 220
ENST00000471507 SZRD1-007 protein_coding Homo_sapiens 0 870
ENST00000472351 SZRD1-004 processed_transcript Homo_sapiens 0 854
ENST00000472461 SZRD1-003 processed_transcript Homo_sapiens 0 689
ENST00000475078 SZRD1-010 processed_transcript Homo_sapiens 0 222
ENST00000475554 SZRD1-008 processed_transcript Homo_sapiens 0 568
ENST00000476423 SZRD1-011 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000486763 SZRD1-009 processed_transcript Homo_sapiens 0 534
ENST00000492354 SZRD1-006 protein_coding Homo_sapiens 0 1480
ENST00000541551 RP11-611O2.2-001 processed_pseudogene Homo_sapiens 0 267

Loading