C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: essential meiotic endonuclease 1 homolog 1 (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039949 Eme1-001 ENSMUSG00000039055 10090 - 11:94644996-94653964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000039949
Transcript ID Liver
ENSMUST00000039949 15.457±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811
CIL_0004IF CIL_0004IF_0002 CGP 11:94644996-94660089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0003677 IEA DNA binding
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005720 IDA nuclear heterochromatin
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0046872 IEA metal ion binding
GO:0072429 IEA response to intra-S DNA damage checkpoint signaling
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338165 EME1-001 protein_coding Homo_sapiens 0 1166
ENST00000393271 EME1-201 protein_coding Homo_sapiens 0 645
ENST00000510007 EME1-003 retained_intron Homo_sapiens 0 435
ENST00000510246 EME1-007 protein_coding Homo_sapiens 0 257
ENST00000511519 EME1-013 protein_coding Homo_sapiens 7e-32 141
ENST00000511648 EME1-002 protein_coding Homo_sapiens 0 612
ENST00000511711 EME1-006 nonsense_mediated_decay Homo_sapiens 0 230

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