Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
ENSMUST00000040001	Galnt9-201	ENSMUSG00000033316	10090	+	5:110544345-110621382	protein_coding

Expression Patterns

Transcript ID	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Ovary	Placenta	Testis
ENSMUST00000040001	0.096±0.08	1.192±0.16	16.077±10.29	0.174±0.08	0.134±0.04	0.012±0.00	0.086±0.05	0.013±0.01	0.058±0.04	0.097±0.06	0.030±0.01	0.115±0.09

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0005575	ND	cellular_component
GO:0005794	IEA	Golgi apparatus
GO:0006486	IEA	protein glycosylation
GO:0008150	ND	biological_process
GO:0008152	IEA	metabolic process
GO:0016021	IEA	integral component of membrane
GO:0016740	IEA	transferase activity
GO:0016757	IEA	transferase activity, transferring glycosyl groups
GO:0030246	IEA	carbohydrate binding
GO:0046872	IEA	metal ion binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSDART00000038740	GALNT9-201	protein_coding	Danio_rerio	0	1009
ENSDART00000144501	GALNT9-001	protein_coding	Danio_rerio	0	527
ENSDART00000147101	GALNT9-002	processed_transcript	Danio_rerio	0	209
ENST00000328957	GALNT9-009	protein_coding	Homo_sapiens	0	1940
ENST00000397325	GALNT9-001	protein_coding	Homo_sapiens	0	813
ENST00000411988	GALNT9-006	protein_coding	Homo_sapiens	0	813
ENST00000424720	GALNT9-010	retained_intron	Homo_sapiens	0	1166
ENST00000535208	GALNT9-008	processed_transcript	Homo_sapiens	0	425
ENST00000541995	GALNT9-002	protein_coding	Homo_sapiens	0	813
ENST00000598504	SLC1A6-003	protein_coding	Homo_sapiens	0.000004	58

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