C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598504 SLC1A6-003 ENSG00000105143 9606 - 19:14961310-14979693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartENST00000598504
Transcript ID Adipose Adrenal Breast Colon Heart
ENST00000598504 0.026±0.00 0.054±0.00 0.037±0.00 0.034±0.00 0.078±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006811 TAS ion transport
GO:0006835 IEA dicarboxylic acid transport
GO:0007268 TAS synaptic transmission
GO:0015183 TAS L-aspartate transmembrane transporter activity
GO:0015810 TAS aspartate transport
GO:0016020 TAS:IEA membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005490 Slc1a6-201 protein_coding Mus_musculus 0 1107
ENSMUST00000165856 Galnt9-202 protein_coding Mus_musculus 0.000004 58
ENSMUST00000040001 Galnt9-201 protein_coding Mus_musculus 0.000004 58

Loading