C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 8a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040496 Bmp8a-001 ENSMUSG00000032726 10090 - 4:123312645-123343252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000040496
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000040496 0.083±0.04 0.020±0.00 0.009±0.00 0.455±0.10 2.305±0.56 0.152±0.03 0.015±0.01 0.111±0.00 0.197±0.00 0.250±0.17 0.401±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0001N3 CIL_0001N3_0003 CGP 4:123312645-123343252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0005125 TAS cytokine activity
GO:0005615 IEA extracellular space
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007281 IMP germ cell development
GO:0007283 IMP spermatogenesis
GO:0008083 IEA growth factor activity
GO:0040007 IEA growth
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331593 BMP8A-001 protein_coding Homo_sapiens 0 1083
ENST00000372827 BMP8B-001 protein_coding Homo_sapiens 0 1081
ENST00000397360 BMP8B-201 protein_coding Homo_sapiens 0 682

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