C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 8b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372827 BMP8B-001 ENSG00000116985 9606 - 1:39757182-39788861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000372827
Transcript ID Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000372827 1.402±0.87 0.858±0.00 1.380±0.00 0.563±0.33 0.228±0.00 0.569±0.21 1.753±0.63 1.341±0.00 2.988±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N3 CIL_0001N3_0001 CGP 1:39757182-39788861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0001503 IEA ossification
GO:0005125 IEA cytokine activity
GO:0005615 IEA extracellular space
GO:0008083 IEA growth factor activity
GO:0030154 IEA cell differentiation
GO:0040007 IEA growth
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102641 Bmp8a-002 protein_coding Mus_musculus 0 1308
ENSMUST00000040496 Bmp8a-001 protein_coding Mus_musculus 0 1081
ENSMUST00000002457 Bmp8b-001 protein_coding Mus_musculus 0 931
ENSMUST00000147575 Cpa6-003 retained_intron Mus_musculus 0.00000001 68
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000007 58

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