C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040523 Adamts2-001 ENSMUSG00000036545 10090 + 11:50602084-50807573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040523 19.938±4.05 3.805±0.68 17.270±2.11 0.424±0.21 15.301±6.40 6.072±0.38 4.478±0.56 2.193±0.60 1.016±0.29 13.090±0.93 1.509±0.16 32.888±10.96 2.875±1.05 0.996±0.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0007283 IMP spermatogenesis
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0016485 IMP protein processing
GO:0030199 IMP collagen fibril organization
GO:0030324 IMP lung development
GO:0030574 IEA collagen catabolic process
GO:0031012 IDA extracellular matrix
GO:0043588 IMP skin development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000084411 adamts3-201 protein_coding Danio_rerio 0 630
ENST00000251582 ADAMTS2-001 protein_coding Homo_sapiens 0 4229
ENST00000274609 ADAMTS2-002 protein_coding Homo_sapiens 0 2006

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