C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251582 ADAMTS2-001 ENSG00000087116 9606 - 5:179110851-179345430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251582
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251582 6.915±0.00 2.694±0.00 0.151±0.13 4.876±3.20 3.070±0.00 0.354±0.15 0.872±0.12 1.875±0.79 1.221±0.92 0.074±0.00 4.100±2.71 11.567±1.32 2.144±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0007283 IEA spermatogenesis
GO:0008233 IEA peptidase activity
GO:0008237 TAS metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0016485 IEA protein processing
GO:0030198 TAS extracellular matrix organization
GO:0030199 IEA collagen fibril organization
GO:0030324 IEA lung development
GO:0030574 IEA collagen catabolic process
GO:0031012 IEA extracellular matrix
GO:0043588 IEA skin development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040523 Adamts2-001 protein_coding Mus_musculus 0 4229
ENSDART00000114158 adamts22-201 protein_coding Danio_rerio 0 691
ENSDART00000147203 adamts22-001 protein_coding Danio_rerio 0 691
ENSMUST00000125988 Adamts2-003 processed_transcript Mus_musculus 0 279
ENSDART00000143149 adamts22-002 retained_intron Danio_rerio 0 193

Loading