C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxidative-stress responsive 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040853 Oxsr1-001 ENSMUSG00000036737 10090 - 9:119238432-119322427 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040853
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040853 9.260±0.66 4.949±2.29 12.356±1.26 10.091±5.87 6.862±1.35 11.567±0.72 8.153±0.87 8.372±1.18 6.341±2.26 9.130±0.97 16.284±1.05 9.504±1.90 12.364±4.60 1.679±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028C CIL_00028C_0002 CGP 9:119193002-119322427
CIL_0008BE CIL_0008BE_0002 VISTA 9:119196374-119798584
CIL_000131 CIL_000131_0002 CGP 9:119238432-119341411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004674 ISS protein serine/threonine kinase activity
GO:0004702 IEA receptor signaling protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 ISS ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 ISS protein phosphorylation
GO:0006979 IDA response to oxidative stress
GO:0018107 IGI peptidyl-threonine phosphorylation
GO:0023014 IEA signal transduction by phosphorylation
GO:0035556 ISS intracellular signal transduction
GO:0070062 IEA extracellular vesicular exosome
GO:0071476 IGI cellular hypotonic response
GO:1901017 IGI negative regulation of potassium ion transmembrane transporter activity
GO:1901380 IGI negative regulation of potassium ion transmembrane transport
GO:2000681 IGI negative regulation of rubidium ion transport
GO:2000687 IGI negative regulation of rubidium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000147004 oxsr1b-001 protein_coding Danio_rerio 0 765
ENSDART00000047073 oxsr1a-001 protein_coding Danio_rerio 0 752
ENSDART00000153918 oxsr1a-002 protein_coding Danio_rerio 0 529
ENST00000311806 OXSR1-001 protein_coding Homo_sapiens 0 3061
ENST00000426620 OXSR1-002 nonsense_mediated_decay Homo_sapiens 0 887
ENST00000446845 OXSR1-004 protein_coding Homo_sapiens 0 1906
ENST00000467900 OXSR1-006 retained_intron Homo_sapiens 0 490
ENST00000483695 OXSR1-003 retained_intron Homo_sapiens 0 577

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