C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000131_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027500-ENSDARG00000010169 CGP 7955 24:20672540-20801448
GeneTranscriptPositionBiotype
ENSDARG00000010169 (myd88)
myeloid differentiation primary response gene (88) 		ENSDART00000011143 (myd88-001) 20797366-20801448 protein_coding
ENSDARG00000027500 (oxsr1b)
oxidative-stress responsive 1b 		ENSDART00000147004 (oxsr1b-001) 20672540-20761417 protein_coding
ENSDARG00000092007 (si:ch211-179l5.4)
si:ch211-179l5.4 		ENSDART00000147603 (si:ch211-179l5.4-001) 20670496-20685748 antisense
CIL_000131_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036737-ENSMUSG00000032508 CGP 10090 9:119238432-119341411
GeneTranscriptPositionBiotype
ENSMUSG00000032508 (Myd88)
myeloid differentiation primary response gene 88 		ENSMUST00000035092 (Myd88-001) 119335934-119340041 protein_coding
ENSMUST00000139870 (Myd88-003) 119339690-119341411 protein_coding
ENSMUST00000150837 (Myd88-002) 119335946-119340002 retained_intron
ENSMUSG00000036138 (Acaa1a)
acetyl-Coenzyme A acyltransferase 1A 		ENSMUST00000039784 (Acaa1a-001) 119341294-119350299 protein_coding
ENSMUST00000175719 (Acaa1a-009) 119348505-119349036 retained_intron
ENSMUST00000175743 (Acaa1a-003) 119341515-119350033 protein_coding
ENSMUST00000175859 (Acaa1a-010) 119341457-119344708 retained_intron
ENSMUST00000176007 (Acaa1a-008) 119346098-119348755 retained_intron
ENSMUST00000176351 (Acaa1a-005) 119339676-119342752 protein_coding
ENSMUST00000176397 (Acaa1a-004) 119341515-119350033 protein_coding
ENSMUST00000176546 (Acaa1a-007) 119342773-119349526 nonsense_mediated_decay
ENSMUST00000176796 (Acaa1a-002) 119341414-119350298 retained_intron
ENSMUST00000177463 (Acaa1a-006) 119341047-119347783 protein_coding
ENSMUSG00000036737 (Oxsr1)
oxidative-stress responsive 1 		ENSMUST00000040853 (Oxsr1-001) 119238432-119322427 protein_coding
ENSMUST00000128880 (Oxsr1-002) 119240670-119322322 nonsense_mediated_decay
ENSMUST00000136902 (Oxsr1-004) 119241145-119243362 retained_intron
ENSMUST00000143728 (Oxsr1-003) 119242768-119264772 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000131_0001ENSDARG00000010169ENSDART00000011143ENSDARG00000027500ENSDART00000147004ENSDARG00000092007ENSDART00000147603CIL_000131_0002ENSMUSG00000032508ENSMUST00000035092ENSMUST00000139870ENSMUST00000150837ENSMUSG00000036138ENSMUST00000039784ENSMUST00000175719ENSMUST00000175743ENSMUST00000175859ENSMUST00000176007ENSMUST00000176351ENSMUST00000176397ENSMUST00000176546ENSMUST00000176796ENSMUST00000177463ENSMUSG00000036737ENSMUST00000040853ENSMUST00000128880ENSMUST00000136902ENSMUST00000143728
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000131_0001ENSDARG00000010169ENSDART00000011143ENSDARG00000027500ENSDART00000147004ENSDARG00000092007ENSDART00000147603CIL_000131_0002ENSMUSG00000032508ENSMUST00000035092ENSMUSG00000036138ENSMUST00000039784ENSMUST00000175743ENSMUST00000175859ENSMUST00000176351ENSMUST00000176397ENSMUST00000176796ENSMUST00000177463ENSMUSG00000036737ENSMUST00000040853ENSMUST00000128880
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010169 ENSDART00000011143 N/A N/A N/A 2.297±1.22 N/A N/A 6.691±1.21 6.106±0.00 1.136±0.00 N/A 1.954±0.00 N/A N/A N/A
ENSDARG00000027500 ENSDART00000147004 N/A N/A N/A 2.336±1.70 N/A N/A 2.841±1.03 3.374±0.41 0.409±0.00 N/A 4.238±0.00 N/A N/A N/A
ENSDARG00000092007 ENSDART00000147603 N/A N/A N/A 0.267±0.00 N/A N/A N/A 0.898±0.00 N/A N/A 0.227±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032508 ENSMUST00000035092 15.047±1.00 N/A 10.044±0.00 N/A 14.010±1.87 N/A 5.312±0.37 N/A 6.496±0.66 16.078±1.29 2.670±0.68 15.447±5.78 18.908±8.39 4.591±2.17
ENSMUST00000139870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036138 ENSMUST00000039784 38.518±9.14 22.048±1.75 41.505±4.96 19.327±8.58 30.959±7.09 39.158±2.89 22.276±3.21 57.866±9.91 38.626±16.52 37.439±5.87 11.658±2.39 34.758±9.75 43.572±19.40 2.748±0.41
ENSMUST00000175719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.424±0.00 N/A N/A N/A
ENSMUST00000175859 N/A 99.007±17.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.898±13.36 N/A N/A
ENSMUST00000176007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176351 N/A N/A N/A N/A N/A 44.525±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176397 N/A N/A N/A 12.802±0.00 N/A N/A N/A N/A N/A N/A N/A 54.181±0.00 56.309±20.50 N/A
ENSMUST00000176546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176796 13.663±1.51 19.539±3.86 16.382±3.46 8.611±4.26 13.964±2.48 14.613±1.81 4.788±0.27 9.490±1.14 7.099±4.02 16.248±0.12 2.596±0.38 14.221±3.27 6.574±1.18 1.434±0.01
ENSMUST00000177463 51.636±6.02 174.021±74.13 N/A N/A 93.825±44.95 89.460±15.37 15.855±0.80 56.383±18.72 60.978±19.20 66.795±21.81 N/A 103.852±25.18 N/A N/A
ENSMUSG00000036737 ENSMUST00000040853 9.260±0.66 4.949±2.29 12.356±1.26 10.091±5.87 6.862±1.35 11.567±0.72 8.153±0.87 8.372±1.18 6.341±2.26 9.130±0.97 16.284±1.05 9.504±1.90 12.364±4.60 1.679±0.74
ENSMUST00000128880 N/A 4.038±2.26 N/A N/A 3.529±0.58 2.945±0.61 N/A N/A 1.146±0.00 N/A N/A 3.419±0.64 N/A N/A
ENSMUST00000136902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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