C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin E receptor 3 (subtype EP3)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041175 Ptger3-001 ENSMUSG00000040016 10090 + 3:157566892-157644758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041175 20.173±2.28 27.823±16.70 0.552±0.09 0.144±0.09 32.300±17.58 8.153±2.39 0.499±0.40 9.015±5.66 0.334±0.19 0.642±0.12 0.172±0.10 5.720±2.59 3.551±0.54 0.053±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005R6 CIL_0005R6_0002 CGP 3:157534160-157644758
CIL_0000WV CIL_0000WV_0002 CGP 3:157566892-157925077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001660 IDA fever generation
GO:0004957 IMP prostaglandin E receptor activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007188 IDA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007200 IDA phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0015701 IMP bicarbonate transport
GO:0016021 IEA integral component of membrane
GO:0032496 IMP response to lipopolysaccharide
GO:0035810 IMP positive regulation of urine volume

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306666 PTGER3-005 protein_coding Homo_sapiens 0 959
ENST00000351052 PTGER3-201 protein_coding Homo_sapiens 0 959
ENST00000354608 PTGER3-202 protein_coding Homo_sapiens 0 959
ENST00000356595 PTGER3-004 protein_coding Homo_sapiens 0 963
ENST00000361210 PTGER3-002 nonsense_mediated_decay Homo_sapiens 0 963
ENST00000370924 PTGER3-008 protein_coding Homo_sapiens 0 955
ENST00000370931 PTGER3-006 protein_coding Homo_sapiens 0 959
ENST00000370932 PTGER3-203 protein_coding Homo_sapiens 0 955
ENST00000460330 PTGER3-007 protein_coding Homo_sapiens 0 963
ENST00000479353 PTGER3-001 nonsense_mediated_decay Homo_sapiens 0 955
ENST00000497146 PTGER3-003 nonsense_mediated_decay Homo_sapiens 0 963

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