C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family M (with RUN domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041272 Plekhm1-001 ENSMUSG00000034247 10090 - 11:103364275-103412687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041272 8.828±0.46 7.974±1.44 9.010±0.27 2.691±0.40 8.575±1.30 18.792±1.37 2.328±0.33 7.399±1.88 3.362±0.76 11.681±2.74 3.726±0.79 6.542±2.29 10.230±6.98 1.793±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D9 CIL_0004D9_0003 CGP 11:103331497-103412687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397718 PLEKHM1P-005 processed_transcript Homo_sapiens 0 329
ENST00000430334 PLEKHM1-001 protein_coding Homo_sapiens 0 1836
ENST00000446609 PLEKHM1-004 nonsense_mediated_decay Homo_sapiens 0 1476
ENST00000578036 PLEKHM1P-003 processed_transcript Homo_sapiens 0 1770
ENST00000579131 PLEKHM1-012 processed_transcript Homo_sapiens 0 363
ENST00000579197 PLEKHM1-003 nonsense_mediated_decay Homo_sapiens 0 1836
ENST00000580205 PLEKHM1-006 processed_transcript Homo_sapiens 0 928
ENST00000580404 PLEKHM1-008 processed_transcript Homo_sapiens 0 660
ENST00000580919 PLEKHM1P-004 processed_transcript Homo_sapiens 0 538
ENST00000581448 PLEKHM1-002 nonsense_mediated_decay Homo_sapiens 0 1836
ENST00000582035 PLEKHM1-007 retained_intron Homo_sapiens 0 928
ENST00000582201 PLEKHM1P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1770
ENST00000582986 PLEKHM1P-002 processed_transcript Homo_sapiens 0 1770
ENST00000584420 PLEKHM1-009 protein_coding Homo_sapiens 0 573
ENST00000584585 PLEKHM1P-006 processed_transcript Homo_sapiens 0 329
ENST00000589780 PLEKHM1-015 protein_coding Homo_sapiens 0 368
ENST00000591580 PLEKHM1-017 protein_coding Homo_sapiens 0 300
ENST00000606688 RP11-927P21.11-001 transcribed_unprocessed_pseudogene Homo_sapiens 7e-40 165
ENST00000613787 PLEKHM1-202 protein_coding Homo_sapiens 0 1836
ENST00000617688 PLEKHM1-201 protein_coding Homo_sapiens 0 1836

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