C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 113
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041569 Ccdc113-201 ENSMUSG00000036598 10090 + 8:95534100-95558888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041569 0.162±0.08 0.181±0.11 0.409±0.01 1.987±2.35 0.060±0.00 0.113±0.03 0.085±0.04 0.081±0.04 0.011±0.00 2.060±0.89 0.023±0.00 1.832±1.40 0.078±0.07 129.088±137.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0002 VISTA 8:95126508-95728314
CIL_00052F CIL_00052F_0003 CGP 8:95446096-95558888
CIL_0004RV CIL_0004RV_0002 CGP 8:95534100-95575455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219299 CCDC113-001 protein_coding Homo_sapiens 0 987
ENST00000443128 CCDC113-002 protein_coding Homo_sapiens 0 719
ENST00000561517 CCDC113-004 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000616795 CCDC113-201 protein_coding Homo_sapiens 0 795

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