C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIIC, polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041638 Gtf3c3-001 ENSMUSG00000041303 10090 - 1:54396004-54438971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041638 4.153±1.37 2.803±0.90 5.332±0.36 4.555±2.08 2.382±1.60 2.017±0.88 2.099±0.78 2.482±1.09 3.229±1.01 3.043±1.34 1.734±0.13 3.658±1.88 3.263±1.41 2.965±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KF CIL_0002KF_0002 CGP 1:54250683-54438971

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000127 IEA transcription factor TFIIIC complex
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088610 rangap1a-001 protein_coding Danio_rerio 0.0000002 62
ENST00000263956 GTF3C3-001 protein_coding Homo_sapiens 0 3365
ENST00000409364 GTF3C3-004 protein_coding Homo_sapiens 0 1659
ENST00000448087 GTF3C3-002 protein_coding Homo_sapiens 0 590
ENST00000455546 GTF3C3-010 nonsense_mediated_decay Homo_sapiens 0 582
ENST00000466862 GTF3C3-007 retained_intron Homo_sapiens 0 267
ENST00000470386 GTF3C3-011 processed_transcript Homo_sapiens 0 937
ENST00000481098 GTF3C3-005 retained_intron Homo_sapiens 0 351

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