C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIIC, polypeptide 3, 102kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263956 GTF3C3-001 ENSG00000119041 9606 - 2:196763032-196799701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263956
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263956 4.102±0.00 2.686±0.99 2.191±0.53 3.218±0.00 1.920±1.41 1.214±0.00 1.494±0.39 1.925±0.31 3.564±2.30 4.278±2.94 3.322±0.37 4.802±2.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KC CIL_0002KC_0001 CGP 2:196194370-196763490
CIL_0002KF CIL_0002KF_0001 CGP 2:196639554-196799725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000127 IDA transcription factor TFIIIC complex
GO:0003677 IC DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006351 IC transcription, DNA-templated
GO:0006383 IC transcription from RNA polymerase III promoter
GO:0010467 TAS gene expression
GO:0042791 IC 5S class rRNA transcription from RNA polymerase III type 1 promoter
GO:0042797 IC tRNA transcription from RNA polymerase III promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041638 Gtf3c3-001 protein_coding Mus_musculus 0 3365
ENSMUST00000189906 Gtf3c3-002 retained_intron Mus_musculus 0 510
ENSMUST00000190419 Gtf3c3-003 retained_intron Mus_musculus 0 279

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