C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 174
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041778 Zfp174-001 ENSMUSG00000054939 10090 + 16:3847268-3858880 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverPlacentaENSMUST00000041778
Transcript ID Adrenal Breast Liver Placenta
ENSMUST00000041778 13.364±0.31 2.063±0.00 2.498±0.15 2.630±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AV CIL_0000AV_0002 CGP 16:3847268-3884561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0015629 ISS actin cytoskeleton
GO:0042803 ISS protein homodimerization activity
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131208 si:dkey-15h8.1-001 protein_coding Danio_rerio 0.00003 57
ENST00000288177 ZNF19-001 protein_coding Homo_sapiens 0.00006 55
ENST00000330236 ZKSCAN8-001 protein_coding Homo_sapiens 0.0000000004 73
ENST00000457389 ZKSCAN8-003 protein_coding Homo_sapiens 0.0000000001 73
ENST00000502859 ZNF859P-001 unprocessed_pseudogene Homo_sapiens 0.00004 55
ENST00000564230 ZNF19-005 protein_coding Homo_sapiens 0.00004 55
ENST00000565100 ZNF19-004 protein_coding Homo_sapiens 0.00004 55
ENST00000565637 ZNF19-002 protein_coding Homo_sapiens 0.00005 55
ENST00000569717 ZNF19-007 nonsense_mediated_decay Homo_sapiens 0.00004 55
ENST00000606198 ZKSCAN8-002 nonsense_mediated_decay Homo_sapiens 0.0000000001 73

Loading