C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330236 ZKSCAN8-001 ENSG00000198315 9606 + 6:28141938-28159472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330236 0.757±0.00 2.087±0.00 0.993±0.00 0.884±0.00 3.029±0.42 1.224±0.32 1.480±0.26 2.002±0.00 2.615±2.29 2.225±0.00 1.207±0.49 2.140±2.04 1.416±0.39 2.636±0.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 0 1965
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 0 636
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 0 466
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 0 333
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 0 333
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 0 209
ENSMUST00000063980 Zkscan7-201 protein_coding Mus_musculus 2e-37 163
ENSMUST00000051667 Zfp105-001 protein_coding Mus_musculus 4e-35 156
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 5e-34 152
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 5e-34 152
ENSMUST00000109128 Zfp2-001 protein_coding Mus_musculus 6e-28 132
ENSMUST00000116378 Zfp2-002 protein_coding Mus_musculus 6e-28 132
ENSMUST00000109129 Zfp2-005 protein_coding Mus_musculus 6e-28 132
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 2e-27 130
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 8e-27 128
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 8e-27 128
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 8e-27 128
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 4e-25 122
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 4e-25 122
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 4e-25 122
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 4e-25 122
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 5e-24 119
ENSMUST00000073924 2810021J22Rik-001 protein_coding Mus_musculus 8e-22 111
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 8e-17 95
ENSMUST00000041778 Zfp174-001 protein_coding Mus_musculus 0.0000000004 73
ENSMUST00000186475 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000187028 nonsense_mediated_decay Mus_musculus 0.000000001 71
ENSMUST00000081618 Zfp780b-201 protein_coding Mus_musculus 0.00000002 68
ENSMUST00000180016 Zfp62-202 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000061757 Zfp62-201 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000136539 Zfp62-010 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000109197 Zfp62-008 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000109198 Zfp62-001 protein_coding Mus_musculus 0.0000002 64

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