C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041965 Cdc42bpb-201 ENSMUSG00000021279 10090 - 12:111292972-111377718 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041965
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041965 24.149±4.58 37.138±14.13 23.102±0.76 31.951±6.62 17.560±8.87 34.994±6.57 8.750±1.19 21.526±6.38 9.848±3.67 33.618±7.66 3.469±0.86 38.274±6.51 46.853±22.72 8.391±1.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_0001GW CIL_0001GW_0002 CGP 12:111271111-111377718

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0005524 ISS ATP binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 ISS cell-cell junction
GO:0006468 ISS protein phosphorylation
GO:0016477 IEA cell migration
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0031032 IEA actomyosin structure organization
GO:0031252 ISS cell leading edge
GO:0031532 ISS actin cytoskeleton reorganization
GO:0035556 IEA intracellular signal transduction
GO:0042641 IEA actomyosin
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000049437 cdc42bpb-001 protein_coding Danio_rerio 0 1284
ENSDART00000113773 CDC42BPA (1 of 2)-201 protein_coding Danio_rerio 0 617
ENSDART00000040456 CDC42BPA (1 of 2)-001 protein_coding Danio_rerio 0 617
ENST00000361246 CDC42BPB-001 protein_coding Homo_sapiens 0 5834
ENST00000558321 CDC42BPB-006 retained_intron Homo_sapiens 0 409
ENST00000558867 CDC42BPB-004 protein_coding Homo_sapiens 0 490
ENST00000559043 CDC42BPB-002 protein_coding Homo_sapiens 0 1262
ENST00000559245 CDC42BPB-007 retained_intron Homo_sapiens 0 754
ENST00000561271 CDC42BPB-003 retained_intron Homo_sapiens 0 374

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