C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166126-ENSG00000198752 CGP 9606 14:102922656-103057462
GeneTranscriptPositionBiotype
ENSG00000166126 (AMN)
amnion associated transmembrane protein 		ENST00000299155 (AMN-001) 102922656-102931192 protein_coding
ENST00000541086 (AMN-002) 102922922-102930841 retained_intron
ENST00000558590 (AMN-003) 102928645-102933596 retained_intron
ENST00000559442 (AMN-005) 102928692-102929475 retained_intron
ENST00000559507 (AMN-004) 102930107-102930619 retained_intron
ENST00000559525 (AMN-006) 102928809-102929475 protein_coding
ENST00000559789 (AMN-007) 102928830-102930591 protein_coding
ENSG00000198752 (CDC42BPB)
CDC42 binding protein kinase beta (DMPK-like) 		ENST00000361246 (CDC42BPB-001) 102932379-103057462 protein_coding
ENST00000558321 (CDC42BPB-006) 102986298-103004023 retained_intron
ENST00000558867 (CDC42BPB-004) 102944011-102945331 protein_coding
ENST00000559043 (CDC42BPB-002) 102944043-102968532 protein_coding
ENST00000559245 (CDC42BPB-007) 102943813-102945724 retained_intron
ENST00000559790 (CDC42BPB-008) 102939916-102940726 retained_intron
ENST00000560492 (CDC42BPB-005) 102939908-102940747 retained_intron
ENST00000561271 (CDC42BPB-003) 102986510-103004279 retained_intron
ENSG00000213176 (RPL13P6)
ribosomal protein L13 pseudogene 6 		ENST00000488133 (RPL13P6-001) 103041469-103042094 processed_pseudogene
ENSG00000259515 (RP11-365N19.2)
 ENST00000560931 (RP11-365N19.2-001) 102933574-102937177 antisense
CIL_0001GW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021278-ENSMUSG00000021279 CGP 10090 12:111271111-111377718
GeneTranscriptPositionBiotype
ENSMUSG00000021278 (Amn)
amnionless 		ENSMUST00000021707 (Amn-201) 111271111-111276426 protein_coding
ENSMUSG00000021279 (Cdc42bpb)
CDC42 binding protein kinase beta 		ENSMUST00000041965 (Cdc42bpb-201) 111292972-111377718 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GW_0001ENSG00000166126ENST00000299155ENST00000541086ENST00000558590ENST00000559442ENST00000559507ENST00000559525ENST00000559789ENSG00000198752ENST00000361246ENST00000558321ENST00000558867ENST00000559043ENST00000559245ENST00000559790ENST00000560492ENST00000561271ENSG00000213176ENST00000488133ENSG00000259515ENST00000560931CIL_0001GW_0002ENSMUSG00000021278ENSMUST00000021707ENSMUSG00000021279ENSMUST00000041965
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GW_0001ENSG00000166126ENST00000299155ENSG00000198752ENST00000361246ENSG00000213176ENST00000488133ENSG00000259515ENST00000560931CIL_0001GW_0002ENSMUSG00000021278ENSMUST00000021707ENSMUSG00000021279ENSMUST00000041965
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166126 ENST00000299155 N/A N/A N/A N/A N/A N/A N/A 52.225±0.00 N/A N/A N/A N/A N/A N/A
ENST00000541086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198752 ENST00000361246 23.766±0.00 6.392±0.00 2.887±0.00 14.857±11.27 19.952±0.00 20.083±0.00 7.379±6.41 1.016±0.00 3.707±0.00 N/A 3.124±2.47 9.043±6.97 15.132±2.75 19.248±0.73
ENST00000558321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213176 ENST00000488133 0.041±0.00 0.182±0.00 0.116±0.00 0.167±0.00 0.149±0.05 0.092±0.00 0.163±0.00 0.049±0.00 0.041±0.00 0.188±0.00 0.268±0.00 N/A N/A 0.147±0.06
ENSG00000259515 ENST00000560931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.874±0.00 24.619±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021278 ENSMUST00000021707 0.080±0.04 0.093±0.04 0.337±0.18 1.489±0.52 0.862±0.47 4.545±2.23 0.028±0.00 103.444±19.66 0.389±0.32 0.138±0.09 0.039±0.01 0.413±0.24 42.430±51.86 1.852±1.24
ENSMUSG00000021279 ENSMUST00000041965 24.149±4.58 37.138±14.13 23.102±0.76 31.951±6.62 17.560±8.87 34.994±6.57 8.750±1.19 21.526±6.38 9.848±3.67 33.618±7.66 3.469±0.86 38.274±6.51 46.853±22.72 8.391±1.51

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