C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor class A, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042046 Scara3-201 ENSMUSG00000034463 10090 - 14:65919395-65953744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042046
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042046 14.146±2.61 1.736±0.21 5.175±0.17 2.695±1.38 18.997±1.52 2.774±0.26 2.058±0.19 0.746±0.09 0.338±0.15 3.214±0.09 1.710±0.18 7.991±1.56 0.380±0.25 1.471±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DK CIL_0009DK_0002 VISTA 14:65449305-66050499

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005581 IEA collagen trimer
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301904 SCARA3-001 protein_coding Homo_sapiens 0 2045
ENST00000337221 SCARA3-002 protein_coding Homo_sapiens 0 1585

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