C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase kinase kinase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042065 Map3k13-201 ENSMUSG00000033618 10090 + 16:21891969-21931877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000042065
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000042065 0.122±0.03 0.416±0.10 0.323±0.00 3.499±0.00 0.320±0.06 0.186±0.00 0.887±0.29 0.195±0.06 0.442±0.12 0.261±0.08 0.203±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056W CIL_00056W_0002 CGP 16:21761287-21931877
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0006RB CIL_0006RB_0002 CGP 16:21891969-21947552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004709 IEA MAP kinase kinase kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0007254 IEA JNK cascade
GO:0008385 IEA IkappaB kinase complex
GO:0016020 IEA membrane
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265026 MAP3K13-001 protein_coding Homo_sapiens 0 2896
ENST00000420577 MAP3K13-013 protein_coding Homo_sapiens 0 771
ENST00000424227 MAP3K13-003 protein_coding Homo_sapiens 0 2896
ENST00000433092 MAP3K13-008 nonsense_mediated_decay Homo_sapiens 0 937
ENST00000438053 MAP3K13-002 nonsense_mediated_decay Homo_sapiens 0 2026
ENST00000439882 MAP3K13-007 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000443863 MAP3K13-006 protein_coding Homo_sapiens 0 2455
ENST00000446828 MAP3K13-004 protein_coding Homo_sapiens 0 2193
ENST00000484062 TMEM41A-009 processed_transcript Homo_sapiens 9.99995e-41 171

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