C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium voltage-gated channel, subfamily H (eag-related), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042299 Kcnh5-201 ENSMUSG00000034402 10090 - 12:74897217-75177332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000042299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000042299 0.188±0.18 0.014±0.00 0.009±0.00 0.566±0.53 0.033±0.01 0.016±0.00 0.069±0.03 0.003±0.00 0.013±0.00 0.120±0.12 0.005±0.00 0.152±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SH CIL_0006SH_0003 CGP 12:74897217-75401456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005516 IEA calmodulin binding
GO:0005622 ISO intracellular
GO:0005887 IBA integral component of plasma membrane
GO:0009986 ISO cell surface
GO:0010389 ISO regulation of G2/M transition of mitotic cell cycle
GO:0023014 IEA signal transduction by phosphorylation
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000029703 kcnh1a-001 protein_coding Danio_rerio 0 1096
ENST00000271751 KCNH1-001 protein_coding Homo_sapiens 0 514
ENST00000322893 KCNH5-004 protein_coding Homo_sapiens 0 4765
ENST00000367007 KCNH1-002 protein_coding Homo_sapiens 0 1195
ENST00000394964 KCNH5-002 retained_intron Homo_sapiens 0 1886
ENST00000394968 KCNH5-003 protein_coding Homo_sapiens 0 2793
ENST00000420622 KCNH5-005 protein_coding Homo_sapiens 0 2684

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