C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: atonal homolog 8 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042646 Atoh8-201 ENSMUSG00000037621 10090 - 6:72206177-72235577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042646 5.245±0.94 1.986±0.50 10.460±0.17 0.771±0.36 3.804±1.32 3.555±0.62 3.426±1.07 3.415±0.59 4.225±3.91 9.444±0.30 1.675±0.41 6.503±1.59 1.799±0.63 45.998±22.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0005SY CIL_0005SY_0002 CGP 6:72097592-72235577

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IEA nervous system development
GO:0030154 IEA cell differentiation
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054689 atoh8-001 protein_coding Danio_rerio 0 239
ENST00000306279 ATOH8-001 protein_coding Homo_sapiens 0 1064
ENST00000463422 ATOH8-003 processed_transcript Homo_sapiens 0 682
ENST00000469442 ATOH8-002 processed_transcript Homo_sapiens 0 322
ENST00000473116 ATOH8-004 processed_transcript Homo_sapiens 0 292

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