C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005SY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037556-ENSDARG00000037555 CGP 7955 14:9653589-9694510
GeneTranscriptPositionBiotype
ENSDARG00000037555 (atoh8)
atonal homolog 8 		ENSDART00000054689 (atoh8-001) 9679437-9694510 protein_coding
ENSDARG00000037556 (st3gal5)
ST3 beta-galactoside alpha-2,3-sialyltransferase 5 		ENSDART00000054690 (st3gal5-001) 9653597-9671354 protein_coding
ENSDART00000135449 (st3gal5-003) 9653589-9657498 protein_coding
ENSDART00000137274 (st3gal5-004) 9657238-9667234 protein_coding
ENSDART00000147923 (st3gal5-002) 9657213-9671366 retained_intron
CIL_0005SY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056091-ENSMUSG00000037621 CGP 10090 6:72097592-72235577
GeneTranscriptPositionBiotype
ENSMUSG00000037621 (Atoh8)
atonal homolog 8 (Drosophila) 		ENSMUST00000042646 (Atoh8-201) 72206177-72235577 protein_coding
ENSMUSG00000056091 (St3gal5)
ST3 beta-galactoside alpha-2,3-sialyltransferase 5 		ENSMUST00000069994 (St3gal5-001) 72097592-72154571 protein_coding
ENSMUST00000114112 (St3gal5-002) 72097623-72154571 protein_coding
ENSMUST00000187007 (St3gal5-003) 72097757-72147150 processed_transcript
ENSMUST00000188366 (St3gal5-004) 72115232-72142271 processed_transcript
ENSMUSG00000101823 (RP24-416M6.1)
predicted gene 29438 		ENSMUST00000191298 (RP24-416M6.1-001) 72104201-72106813 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SY_0001ENSDARG00000037555ENSDART00000054689ENSDARG00000037556ENSDART00000054690ENSDART00000135449ENSDART00000137274ENSDART00000147923CIL_0005SY_0002ENSMUSG00000037621ENSMUST00000042646ENSMUSG00000056091ENSMUST00000069994ENSMUST00000114112ENSMUST00000187007ENSMUST00000188366ENSMUSG00000101823ENSMUST00000191298
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SY_0001ENSDARG00000037555ENSDART00000054689ENSDARG00000037556ENSDART00000054690ENSDART00000135449CIL_0005SY_0002ENSMUSG00000037621ENSMUST00000042646ENSMUSG00000056091ENSMUST00000069994ENSMUST00000114112ENSMUST00000188366ENSMUSG00000101823ENSMUST00000191298
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037555 ENSDART00000054689 N/A N/A N/A 3.065±0.64 N/A N/A 4.769±0.84 2.864±0.30 0.141±0.00 N/A 8.540±0.00 N/A N/A N/A
ENSDARG00000037556 ENSDART00000054690 N/A N/A N/A N/A N/A N/A 1.508±0.17 13.708±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000135449 N/A N/A N/A 10.149±0.00 N/A N/A 2.702±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037621 ENSMUST00000042646 5.245±0.94 1.986±0.50 10.460±0.17 0.771±0.36 3.804±1.32 3.555±0.62 3.426±1.07 3.415±0.59 4.225±3.91 9.444±0.30 1.675±0.41 6.503±1.59 1.799±0.63 45.998±22.50
ENSMUSG00000056091 ENSMUST00000069994 4.250±1.94 112.397±22.25 9.623±0.24 24.480±19.20 4.098±0.92 1.755±0.45 13.263±2.46 3.119±0.71 64.102±45.89 16.172±1.38 24.801±2.76 64.530±24.80 7.739±4.34 10.962±2.79
ENSMUST00000114112 1.152±0.42 47.226±20.72 1.417±0.18 1.944±0.49 0.699±0.06 0.550±0.08 N/A 0.582±0.05 25.878±5.23 2.400±0.26 N/A 54.027±3.74 1.125±0.13 1.501±0.19
ENSMUST00000187007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188366 N/A N/A N/A 65.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000101823 ENSMUST00000191298 0.060±0.06 0.126±0.05 0.059±0.02 0.086±0.07 0.082±0.02 N/A 0.032±0.00 0.036±0.00 0.334±0.21 0.100±0.03 0.012±0.00 0.297±0.24 0.055±0.05 0.076±0.05

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