C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 8 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042699 Aldh8a1-001 ENSMUSG00000037542 10090 + 10:21377291-21396585 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042699
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042699 0.029±0.00 0.009±0.00 0.047±0.03 0.240±0.18 0.029±0.00 0.091±0.02 75.765±27.81 79.169±61.46 0.082±0.06 0.031±0.01 0.090±0.04 0.466±0.39 1.008±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0002 VISTA 10:20781770-21384133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001758 ISS retinal dehydrogenase activity
GO:0005622 ISS intracellular
GO:0005737 IEA cytoplasm
GO:0042573 ISS retinoic acid metabolic process
GO:0042574 ISS retinal metabolic process
GO:0042904 IDA 9-cis-retinoic acid biosynthetic process
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265605 ALDH8A1-001 protein_coding Homo_sapiens 0 1539
ENST00000349305 ALDH8A1-004 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000367845 ALDH8A1-002 protein_coding Homo_sapiens 0 470
ENST00000367847 ALDH8A1-006 protein_coding Homo_sapiens 0 929
ENST00000460753 ALDH8A1-003 protein_coding Homo_sapiens 0 337

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