C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1K (PP2C domain containing)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042766 Ppm1k-001 ENSMUSG00000037826 10090 - 6:57506502-57535426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042766
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042766 1.342±0.23 2.712±0.45 2.629±0.34 3.567±3.06 1.974±0.22 0.923±0.34 13.122±0.68 2.588±1.02 8.150±4.95 1.517±0.26 2.185±0.22 2.437±0.69 0.608±0.10 0.479±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KK CIL_0000KK_0002 CGP 6:57506502-57665136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005739 IDA mitochondrion
GO:0006470 IEA protein dephosphorylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295908 PPM1K-009 protein_coding Homo_sapiens 0 976
ENST00000505022 PPM1K-007 protein_coding Homo_sapiens 0 403
ENST00000506423 PPM1K-003 processed_transcript Homo_sapiens 0 573
ENST00000508256 PPM1K-004 protein_coding Homo_sapiens 0 852
ENST00000510548 PPM1K-005 protein_coding Homo_sapiens 0 375
ENST00000511506 PPM1K-008 retained_intron Homo_sapiens 0 344
ENST00000513546 PPM1K-010 retained_intron Homo_sapiens 0 466
ENST00000514204 PPM1K-002 protein_coding Homo_sapiens 0 573
ENST00000608933 PPM1K-001 protein_coding Homo_sapiens 0 1327

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