C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroblastoma amplified sequence
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042953 Nbas-201 ENSMUSG00000020576 10090 + 12:13269127-13583810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042953 5.465±0.50 3.782±1.00 4.827±0.26 5.669±1.53 4.040±0.42 4.079±1.50 2.870±0.63 3.115±0.82 2.582±0.64 5.230±0.45 2.556±0.17 6.424±2.00 3.634±0.97 8.235±2.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000956 IEA nuclear-transcribed mRNA catabolic process
GO:0003674 ND molecular_function
GO:0016020 IEA membrane
GO:2000623 IEA negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281513 NBAS-001 protein_coding Homo_sapiens 0 4689
ENST00000417461 NBAS-003 protein_coding Homo_sapiens 0 580
ENST00000423602 NBAS-006 protein_coding Homo_sapiens 0 335
ENST00000433283 NBAS-005 protein_coding Homo_sapiens 0 237
ENST00000441755 NBAS-008 protein_coding Homo_sapiens 0 750
ENST00000442506 NBAS-002 protein_coding Homo_sapiens 0 2329

Loading