C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 189
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042964 Zfp189-002 ENSMUSG00000039634 10090 + 4:49521176-49531517 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000042964
Transcript ID Adrenal Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000042964 0.489±0.14 0.134±0.04 0.098±0.00 0.282±0.11 0.460±0.22 0.368±0.25 0.248±0.00 2.253±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZX CIL_0001ZX_0002 CGP 4:49512596-49531517
CIL_0001ZW CIL_0001ZW_0002 CGP 4:49521176-49549546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259395 ZNF189-003 protein_coding Homo_sapiens 0 2252
ENST00000317398 ZNF671-001 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000335820 ZNF671-201 protein_coding Homo_sapiens 0.000000000000004 88
ENST00000339664 ZNF189-001 protein_coding Homo_sapiens 0 2244
ENST00000343459 ZNF34-006 protein_coding Homo_sapiens 0.00000002 66
ENST00000374861 ZNF189-002 protein_coding Homo_sapiens 0 2270
ENST00000429371 ZNF34-002 protein_coding Homo_sapiens 0.00000002 66
ENST00000527740 ZNF34-004 retained_intron Homo_sapiens 0.00000002 66
ENST00000591344 ZNF850-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000600125 ZNF671-004 nonsense_mediated_decay Homo_sapiens 0.000000000000005 88
ENST00000601584 ZNF671-002 nonsense_mediated_decay Homo_sapiens 0.000000000000003 88
ENST00000614887 ZNF850-201 protein_coding Homo_sapiens 0.00000000003 77
ENST00000615466 ZNF189-201 protein_coding Homo_sapiens 0 2135

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