C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase bubblegum family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043062 Acsbg2-001 ENSMUSG00000024207 10090 - 17:56843103-56874447 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000043062
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000043062 0.103±0.05 0.011±0.00 0.020±0.00 0.012±0.00 0.040±0.01 0.025±0.01 0.015±0.00 0.013±0.00 0.040±0.02 0.022±0.00 81.500±8.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GQ CIL_0005GQ_0003 CGP 17:56775897-56874447

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 IDA cytosol
GO:0006631 IDA fatty acid metabolic process
GO:0006635 IC fatty acid beta-oxidation
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation
GO:0047617 IEA acyl-CoA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000586696 ACSBG2-002 protein_coding Homo_sapiens 0 817
ENST00000587617 ACSBG2-009 nonsense_mediated_decay Homo_sapiens 5e-40 169
ENST00000588304 ACSBG2-007 protein_coding Homo_sapiens 0 809
ENST00000588485 ACSBG2-001 protein_coding Homo_sapiens 2e-39 169
ENST00000588722 ACSBG2-006 protein_coding Homo_sapiens 0 215
ENST00000589401 ACSBG2-005 protein_coding Homo_sapiens 4e-20 102
ENST00000591403 ACSBG2-003 protein_coding Homo_sapiens 0 817
ENST00000591738 ACSBG2-004 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000592677 ACSBG2-008 nonsense_mediated_decay Homo_sapiens 5e-40 169

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