C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apoptosis resistant E3 ubiquitin protein ligase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043169 Arel1-001 ENSMUSG00000042350 10090 - 12:84918150-84970900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043169 9.528±3.50 11.458±5.29 9.450±1.37 14.088±6.97 7.686±2.14 11.722±2.89 8.735±2.81 6.279±0.69 10.626±3.71 12.339±4.61 6.291±0.71 5.730±2.87 4.985±2.01 11.893±4.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AZ CIL_0005AZ_0002 CGP 12:84918148-84983303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA:ISS ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0005829 ISS cytosol
GO:0006915 IEA apoptotic process
GO:0016874 IEA ligase activity
GO:0042787 IBA:ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043066 ISS negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356357 AREL1-001 protein_coding Homo_sapiens 0 3670
ENST00000469797 AREL1-003 retained_intron Homo_sapiens 0 2279
ENST00000481010 AREL1-018 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000553279 AREL1-021 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000553411 AREL1-016 nonsense_mediated_decay Homo_sapiens 6e-34 148
ENST00000554070 AREL1-020 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000555249 AREL1-014 protein_coding Homo_sapiens 0 638
ENST00000555330 AREL1-012 nonsense_mediated_decay Homo_sapiens 0 2061
ENST00000556202 AREL1-007 protein_coding Homo_sapiens 0 2819
ENST00000556327 AREL1-005 retained_intron Homo_sapiens 0 1112
ENST00000556589 AREL1-011 processed_transcript Homo_sapiens 0 302
ENST00000557401 AREL1-009 processed_transcript Homo_sapiens 0 3325
ENST00000557688 AREL1-019 retained_intron Homo_sapiens 0 390

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