C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119682-ENSG00000119616 CGP 9606 14:74653437-74738620
GeneTranscriptPositionBiotype
ENSG00000119616 (FCF1)
FCF1 rRNA-processing protein 		ENST00000341162 (FCF1-001) 74713144-74738620 protein_coding
ENST00000534938 (FCF1-007) 74713170-74735040 protein_coding
ENST00000553615 (FCF1-003) 74713170-74735304 protein_coding
ENST00000553673 (FCF1-009) 74713204-74723343 nonsense_mediated_decay
ENST00000554064 (FCF1-008) 74713170-74732812 nonsense_mediated_decay
ENST00000554590 (FCF1-002) 74713144-74732817 protein_coding
ENST00000554973 (FCF1-010) 74715672-74732793 retained_intron
ENST00000556814 (FCF1-006) 74713168-74734917 nonsense_mediated_decay
ENSG00000119682 (AREL1)
apoptosis resistant E3 ubiquitin protein ligase 1 		ENST00000356357 (AREL1-001) 74661252-74713115 protein_coding
ENST00000469797 (AREL1-003) 74670642-74713067 retained_intron
ENST00000473934 (AREL1-004) 74691059-74713087 processed_transcript
ENST00000481010 (AREL1-018) 74669687-74675708 nonsense_mediated_decay
ENST00000490805 (AREL1-017) 74673184-74676215 protein_coding
ENST00000553279 (AREL1-021) 74675866-74685646 nonsense_mediated_decay
ENST00000553411 (AREL1-016) 74675788-74683395 nonsense_mediated_decay
ENST00000554070 (AREL1-020) 74653437-74664065 nonsense_mediated_decay
ENST00000554525 (AREL1-015) 74692016-74712943 processed_transcript
ENST00000555249 (AREL1-014) 74683389-74713080 protein_coding
ENST00000555330 (AREL1-012) 74661272-74685660 nonsense_mediated_decay
ENST00000556202 (AREL1-007) 74663814-74713087 protein_coding
ENST00000556327 (AREL1-005) 74670071-74676024 retained_intron
ENST00000556589 (AREL1-011) 74683296-74713098 processed_transcript
ENST00000556860 (AREL1-013) 74692102-74713087 processed_transcript
ENST00000557401 (AREL1-009) 74660221-74713108 processed_transcript
ENST00000557688 (AREL1-019) 74663671-74664954 retained_intron
ENSG00000222604 (SNORA7)
Small nucleolar RNA SNORA7 		ENST00000410672 (SNORA7.1-205) 74711936-74712045 snoRNA
ENSG00000258439 (RP11-173A8.2)
 ENST00000555623 (RP11-173A8.2-001) 74658049-74658590 processed_pseudogene
CIL_0005AZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042350-ENSMUSG00000021243 CGP 10090 12:84918148-84983303
GeneTranscriptPositionBiotype
ENSMUSG00000021243 (Fcf1)
FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) 		ENSMUST00000021669 (Fcf1-001) 84970897-84983303 protein_coding
ENSMUST00000171040 (Fcf1-002) 84970981-84983291 protein_coding
ENSMUST00000172241 (Fcf1-003) 84980210-84983297 retained_intron
ENSMUSG00000042350 (Arel1)
apoptosis resistant E3 ubiquitin protein ligase 1 		ENSMUST00000043169 (Arel1-001) 84918150-84970900 protein_coding
ENSMUST00000163231 (Arel1-002) 84918148-84970824 nonsense_mediated_decay
ENSMUST00000163372 (Arel1-007) 84934319-84943378 nonsense_mediated_decay
ENSMUST00000165093 (Arel1-004) 84941761-84945398 protein_coding
ENSMUST00000165886 (Arel1-006) 84941791-84970838 protein_coding
ENSMUST00000167448 (Arel1-003) 84941782-84970856 protein_coding
ENSMUST00000168713 (Arel1-005) 84951082-84966030 processed_transcript
ENSMUST00000169161 (Arel1-008) 84940161-84946923 protein_coding
ENSMUSG00000079645 (Gm17193)
predicted gene 17193 		ENSMUST00000116345 (Gm17193-001) 84922542-84923512 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AZ_0001ENSG00000119616ENST00000341162ENST00000534938ENST00000553615ENST00000553673ENST00000554064ENST00000554590ENST00000554973ENST00000556814ENSG00000119682ENST00000356357ENST00000469797ENST00000473934ENST00000481010ENST00000490805ENST00000553279ENST00000553411ENST00000554070ENST00000554525ENST00000555249ENST00000555330ENST00000556202ENST00000556327ENST00000556589ENST00000556860ENST00000557401ENST00000557688ENSG00000222604ENST00000410672ENSG00000258439ENST00000555623CIL_0005AZ_0002ENSMUSG00000021243ENSMUST00000021669ENSMUST00000171040ENSMUST00000172241ENSMUSG00000042350ENSMUST00000043169ENSMUST00000163231ENSMUST00000163372ENSMUST00000165093ENSMUST00000165886ENSMUST00000167448ENSMUST00000168713ENSMUST00000169161ENSMUSG00000079645ENSMUST00000116345
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AZ_0001ENSG00000119616ENST00000341162ENST00000534938ENST00000553615ENST00000554973ENST00000556814ENSG00000119682ENST00000356357ENST00000469797ENST00000481010ENST00000555330ENST00000556202ENST00000556327ENSG00000222604ENST00000410672ENSG00000258439ENST00000555623CIL_0005AZ_0002ENSMUSG00000021243ENSMUST00000021669ENSMUST00000171040ENSMUSG00000042350ENSMUST00000043169ENSMUST00000163231ENSMUSG00000079645ENSMUST00000116345
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119616 ENST00000341162 N/A N/A 0.120±0.00 0.254±0.00 1.163±0.00 4.093±0.00 1.603±1.29 3.013±0.00 1.739±0.00 N/A 0.870±0.76 2.960±1.60 2.710±0.71 1.626±1.16
ENST00000534938 N/A N/A 1.141±0.00 1.018±0.00 2.228±0.00 2.415±0.00 3.162±0.00 N/A 2.331±0.00 3.920±0.00 N/A 4.938±2.35 N/A 1.616±0.00
ENST00000553615 8.021±0.00 5.307±0.00 0.775±0.00 5.797±0.00 10.314±0.00 8.094±0.00 1.390±0.57 3.240±2.38 2.738±0.00 3.909±0.00 2.807±0.00 5.090±2.73 4.679±1.17 5.484±3.15
ENST00000553673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554973 N/A N/A 1.217±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556814 N/A N/A 0.645±0.00 1.766±0.00 3.254±0.00 1.577±0.00 N/A 1.934±0.00 1.754±0.00 N/A 2.420±0.00 3.600±1.52 7.206±0.00 2.094±0.00
ENSG00000119682 ENST00000356357 2.328±0.00 1.432±0.00 2.355±0.00 3.422±1.01 1.305±0.06 0.697±0.00 2.059±0.88 2.027±0.00 1.410±0.20 1.813±0.33 1.526±0.00 1.962±1.64 1.863±0.77 3.263±1.00
ENST00000469797 N/A N/A N/A N/A 1.394±0.00 2.041±0.00 N/A N/A N/A N/A N/A 1.605±0.00 N/A N/A
ENST00000473934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481010 N/A N/A N/A N/A N/A N/A N/A 2.901±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555330 1.104±0.00 N/A N/A 0.955±0.29 0.670±0.00 3.033±0.00 1.279±0.00 2.695±0.91 1.139±0.00 1.308±0.19 1.705±0.00 1.059±0.00 2.422±0.00 3.948±0.37
ENST00000556202 N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A N/A N/A 0.533±0.00 0.722±0.00 N/A N/A
ENST00000556327 N/A N/A N/A N/A N/A N/A 2.045±0.00 N/A N/A N/A 2.577±0.00 N/A N/A N/A
ENST00000556589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222604 ENST00000410672 N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258439 ENST00000555623 N/A 0.137±0.00 0.333±0.00 0.058±0.00 0.083±0.00 N/A 0.084±0.00 0.269±0.00 0.603±0.53 0.089±0.00 N/A 0.201±0.12 0.078±0.00 0.167±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021243 ENSMUST00000021669 27.899±2.02 N/A 45.743±1.31 34.461±2.19 54.572±0.00 N/A 17.146±0.00 24.079±1.66 69.187±25.76 N/A 12.542±0.83 31.538±17.54 40.179±21.10 28.305±12.48
ENSMUST00000171040 30.850±0.00 N/A N/A N/A N/A N/A N/A 24.247±0.00 N/A N/A N/A 33.307±4.06 45.443±11.38 N/A
ENSMUST00000172241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042350 ENSMUST00000043169 9.528±3.50 11.458±5.29 9.450±1.37 14.088±6.97 7.686±2.14 11.722±2.89 8.735±2.81 6.279±0.69 10.626±3.71 12.339±4.61 6.291±0.71 5.730±2.87 4.985±2.01 11.893±4.43
ENSMUST00000163231 N/A N/A N/A N/A 3.519±0.00 N/A N/A N/A N/A N/A N/A 9.848±0.00 N/A N/A
ENSMUST00000163372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079645 ENSMUST00000116345 0.509±0.20 0.453±0.03 0.815±0.15 1.410±0.16 0.363±0.09 0.269±0.00 0.353±0.13 0.221±0.09 0.888±0.39 N/A 0.094±0.03 1.022±0.47 0.579±0.18 0.408±0.19

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