C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD and tetratricopeptide repeats 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043305 Wdtc1-001 ENSMUSG00000037622 10090 - 4:133292459-133339324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043305 12.970±1.48 29.215±4.04 8.934±0.92 12.614±3.80 16.380±5.13 26.658±6.28 21.981±2.74 19.088±6.58 19.962±16.61 20.089±5.06 31.600±6.64 19.119±7.73 3.529±0.82 60.429±43.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0002 VISTA 4:132816592-133418424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001701 IMP in utero embryonic development
GO:0004857 IDA enzyme inhibitor activity
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006006 IMP glucose metabolic process
GO:0008361 IMP regulation of cell size
GO:0016567 IEA protein ubiquitination
GO:0032869 IMP cellular response to insulin stimulus
GO:0035264 IMP multicellular organism growth
GO:0042393 IPI histone binding
GO:0042826 IPI histone deacetylase binding
GO:0043086 IDA negative regulation of catalytic activity
GO:0045717 IDA negative regulation of fatty acid biosynthetic process
GO:0055082 IMP cellular chemical homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113358 wdtc1-001 protein_coding Danio_rerio 0 459
ENSDART00000154023 wdtc1-002 protein_coding Danio_rerio 3e-33 148
ENST00000319394 WDTC1-201 protein_coding Homo_sapiens 0 3373
ENST00000361771 WDTC1-001 protein_coding Homo_sapiens 0 3308
ENST00000447062 WDTC1-003 nonsense_mediated_decay Homo_sapiens 0 2128
ENST00000472249 WDTC1-004 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000491239 WDTC1-002 retained_intron Homo_sapiens 0 1657

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