C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SFT2 domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043338 Sft2d2-201 ENSMUSG00000040848 10090 - 1:165174341-165194433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043338 24.208±0.99 19.185±5.78 11.385±0.22 2.768±0.23 32.216±5.57 42.378±8.17 8.858±1.14 21.444±5.09 10.332±6.10 32.328±5.04 4.477±0.64 28.764±13.25 4.912±3.32 2.625±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CV CIL_0005CV_0002 CGP 1:165137855-165194433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271375 SFT2D2-001 protein_coding Homo_sapiens 0 573
ENST00000367829 SFT2D2-003 protein_coding Homo_sapiens 0 239
ENST00000471981 SFT2D2-002 processed_transcript Homo_sapiens 0 353

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