C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005CV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079187-ENSDARG00000071159 CGP 7955 6:8577293-8607444
GeneTranscriptPositionBiotype
ENSDARG00000071159 (SFT2D2 (2 of 2))
SFT2 domain containing 2 		ENSDART00000104996 (SFT2D2 (2 of 2)-201) 8598116-8607444 protein_coding
ENSDART00000150916 (SFT2D2 (2 of 2)-001) 8598115-8607444 protein_coding
ENSDARG00000079187 (tbx19)
T-box 19 		ENSDART00000115394 (tbx19-201) 8577293-8595585 protein_coding
ENSDART00000150167 (tbx19-001) 8579682-8595609 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005CV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026572-ENSMUSG00000040848 CGP 10090 1:165137855-165194433
GeneTranscriptPositionBiotype
ENSMUSG00000026572 (Tbx19)
T-box 19 		ENSMUST00000027859 (Tbx19-001) 165137855-165160773 protein_coding
ENSMUST00000160350 (Tbx19-003) 165142439-165149379 processed_transcript
ENSMUST00000161144 (Tbx19-004) 165138947-165153726 protein_coding
ENSMUST00000161777 (Tbx19-002) 165138889-165149694 processed_transcript
ENSMUSG00000040848 (Sft2d2)
SFT2 domain containing 2 		ENSMUST00000043338 (Sft2d2-201) 165174341-165194433 protein_coding
ENSMUSG00000089967 (Gm16550)
predicted gene 16550 		ENSMUST00000162550 (Gm16550-001) 165148824-165148949 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CV_0001ENSDARG00000071159ENSDART00000104996ENSDART00000150916ENSDARG00000079187ENSDART00000115394ENSDART00000150167CIL_0005CV_0002ENSMUSG00000026572ENSMUST00000027859ENSMUST00000160350ENSMUST00000161144ENSMUST00000161777ENSMUSG00000040848ENSMUST00000043338ENSMUSG00000089967ENSMUST00000162550
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CV_0001ENSDARG00000071159ENSDART00000104996ENSDART00000150916ENSDARG00000079187ENSDART00000115394ENSDART00000150167CIL_0005CV_0002ENSMUSG00000026572ENSMUST00000027859ENSMUST00000160350ENSMUST00000161144ENSMUST00000161777ENSMUSG00000040848ENSMUST00000043338ENSMUSG00000089967ENSMUST00000162550
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071159 ENSDART00000104996 N/A N/A N/A 0.614±0.25 N/A N/A 0.817±0.42 5.099±0.99 1.165±0.00 N/A 0.300±0.00 N/A N/A N/A
ENSDART00000150916 N/A N/A N/A 0.946±0.82 N/A N/A 1.397±0.00 0.401±0.00 N/A N/A 0.491±0.00 N/A N/A N/A
ENSDARG00000079187 ENSDART00000115394 N/A N/A N/A 0.247±0.11 N/A N/A 0.096±0.00 N/A 0.055±0.00 N/A 0.166±0.00 N/A N/A N/A
ENSDART00000150167 N/A N/A N/A 0.175±0.00 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026572 ENSMUST00000027859 0.020±0.01 N/A 0.003±0.00 0.037±0.03 N/A N/A N/A N/A 0.008±0.01 0.053±0.04 0.034±0.01 0.180±0.12 N/A N/A
ENSMUST00000160350 N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 0.198±0.12 N/A 0.431±0.25 N/A N/A
ENSMUST00000161144 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.05 N/A N/A 0.237±0.14 N/A N/A
ENSMUST00000161777 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.086±0.04 N/A N/A 0.389±0.20 0.005±0.00 2.296±0.00
ENSMUSG00000040848 ENSMUST00000043338 24.208±0.99 19.185±5.78 11.385±0.22 2.768±0.23 32.216±5.57 42.378±8.17 8.858±1.14 21.444±5.09 10.332±6.10 32.328±5.04 4.477±0.64 28.764±13.25 4.912±3.32 2.625±0.95
ENSMUSG00000089967 ENSMUST00000162550 N/A N/A 31.631±0.00 24.017±12.56 N/A N/A N/A N/A 66.984±26.23 N/A N/A N/A N/A N/A

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