C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein U-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043765 Hnrnpul1-201 ENSMUSG00000040725 10090 - 7:25721498-25754730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043765 18.735±6.86 17.817±1.07 8.194±1.12 24.146±10.01 16.860±6.89 26.837±1.47 10.597±2.94 14.763±2.51 15.074±6.61 17.318±1.36 14.094±2.45 35.312±9.66 29.307±12.50 36.397±8.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0002 VISTA 7:25324415-25925712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006396 IEA RNA processing
GO:0009615 IEA response to virus
GO:0019899 IEA enzyme binding
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263367 HNRNPUL1-011 protein_coding Homo_sapiens 0 2998
ENST00000352456 HNRNPUL1-001 protein_coding Homo_sapiens 0 2826
ENST00000378215 HNRNPUL1-004 protein_coding Homo_sapiens 0 1958
ENST00000392006 HNRNPUL1-003 protein_coding Homo_sapiens 0 3592
ENST00000593587 HNRNPUL1-010 protein_coding Homo_sapiens 0 2998
ENST00000594207 HNRNPUL1-021 processed_transcript Homo_sapiens 0 706
ENST00000595018 HNRNPUL1-002 protein_coding Homo_sapiens 0 2998
ENST00000595196 HNRNPUL1-009 nonsense_mediated_decay Homo_sapiens 0 2998
ENST00000595806 HNRNPUL1-006 retained_intron Homo_sapiens 0 1016
ENST00000597725 HNRNPUL1-020 protein_coding Homo_sapiens 0 660
ENST00000598758 TGFB1-004 protein_coding Homo_sapiens 6e-18 95
ENST00000599614 HNRNPUL1-007 protein_coding Homo_sapiens 0 2326
ENST00000599719 HNRNPUL1-008 protein_coding Homo_sapiens 0 1435
ENST00000600596 HNRNPUL1-017 nonsense_mediated_decay Homo_sapiens 0 424
ENST00000601309 HNRNPUL1-019 protein_coding Homo_sapiens 0 398
ENST00000601336 HNRNPUL1-018 protein_coding Homo_sapiens 0 558
ENST00000602130 HNRNPUL1-005 protein_coding Homo_sapiens 0 3014
ENST00000617305 HNRNPUL1-201 protein_coding Homo_sapiens 0 518
ENST00000617774 HNRNPUL1-202 protein_coding Homo_sapiens 0 387

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