C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044106 Psmd7-201 ENSMUSG00000039067 10090 - 8:107580381-107588482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044106 34.567±3.70 26.822±5.36 46.547±2.71 46.422±4.54 29.061±4.35 22.243±1.04 30.540±1.75 27.868±4.56 48.591±17.25 31.939±1.96 69.539±5.00 53.551±6.01 62.551±22.23 22.512±4.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0002 VISTA 8:107038845-107639359
CIL_00090U CIL_00090U_0002 VISTA 8:107303123-107903792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005634 IEA nucleus
GO:0005838 IDA proteasome regulatory particle
GO:0016020 IEA membrane
GO:0042803 IEA protein homodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219313 PSMD7-001 protein_coding Homo_sapiens 0 1260
ENST00000422197 RP11-275F13.3-001 processed_pseudogene Homo_sapiens 0 819
ENST00000563150 PSMD7-006 retained_intron Homo_sapiens 0 520
ENST00000566015 PSMD7-003 retained_intron Homo_sapiens 0 316
ENST00000567958 PSMD7-004 protein_coding Homo_sapiens 0 717
ENST00000568615 PSMD7-005 protein_coding Homo_sapiens 0 717
ENST00000568717 PSMD7-002 nonsense_mediated_decay Homo_sapiens 0 1086
ENST00000579375 PSMD7P1-001 processed_pseudogene Homo_sapiens 0 573

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