C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2 nucleolar protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044200 Nop2-201 ENSMUSG00000038279 10090 + 6:125131883-125144753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044200 8.410±2.77 3.769±1.35 10.536±0.89 9.940±1.43 6.110±2.32 6.228±2.26 3.597±0.39 7.196±0.77 11.624±8.00 4.749±0.90 6.461±0.55 10.997±4.43 21.173±9.72 10.928±2.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0006364 IEA rRNA processing
GO:0008150 ND biological_process
GO:0008757 IEA S-adenosylmethionine-dependent methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322166 NOP2-007 protein_coding Homo_sapiens 0 1609
ENST00000382421 NOP2-001 protein_coding Homo_sapiens 0 1504
ENST00000399466 NOP2-002 protein_coding Homo_sapiens 0 1609
ENST00000536506 NOP2-017 retained_intron Homo_sapiens 0 628
ENST00000537442 NOP2-003 protein_coding Homo_sapiens 0 1609
ENST00000537708 NOP2-011 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000541778 NOP2-005 protein_coding Homo_sapiens 0 1609
ENST00000542015 NOP2-010 processed_transcript Homo_sapiens 0 556
ENST00000542919 NOP2-013 retained_intron Homo_sapiens 0 765
ENST00000544630 NOP2-012 retained_intron Homo_sapiens 0 309
ENST00000545200 NOP2-004 protein_coding Homo_sapiens 0 1500
ENST00000616948 NOP2-201 protein_coding Homo_sapiens 0 1609
ENST00000617555 NOP2-202 protein_coding Homo_sapiens 0 1500
ENST00000620535 NOP2-203 protein_coding Homo_sapiens 0 1504

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