C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COX assembly mitochondrial protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044220 Cmc1-201 ENSMUSG00000039163 10090 - 9:118064529-118150196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044220 3.528±0.46 7.605±2.67 12.827±0.16 6.537±1.40 2.588±0.81 2.826±0.46 3.407±0.22 5.053±1.34 4.719±1.80 2.740±0.43 6.260±1.38 6.235±6.14 6.222±1.22 1.449±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L2 CIL_0008L2_0002 VISTA 9:118017970-118619794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334841 CMC1-005 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000396610 CMC1-006 retained_intron Homo_sapiens 0 387
ENST00000418849 CMC1-009 protein_coding Homo_sapiens 0 383
ENST00000423894 CMC1-004 protein_coding Homo_sapiens 0 291
ENST00000466830 CMC1-002 protein_coding Homo_sapiens 0 431
ENST00000467644 CMC1-010 processed_transcript Homo_sapiens 0 291
ENST00000469102 CMC1-003 processed_transcript Homo_sapiens 0 291
ENST00000477739 CMC1-001 retained_intron Homo_sapiens 2e-39 169
ENST00000482499 CMC1-011 processed_transcript Homo_sapiens 3e-40 169
ENST00000495428 CMC1-008 processed_transcript Homo_sapiens 4.00001e-40 169

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