C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008L2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1557 VISTA 9606 3:27692337-28294260
GeneTranscriptPositionBiotype
ENSG00000163508 (EOMES)
eomesodermin 		ENST00000295743 (EOMES-001) 27715949-27722498 protein_coding
ENST00000449599 (EOMES-002) 27716377-27722312 protein_coding
ENST00000461503 (EOMES-004) 27718864-27722711 processed_transcript
ENSG00000187118 (CMC1)
C-x(9)-C motif containing 1 		ENST00000334841 (CMC1-005) 28241624-28319773 nonsense_mediated_decay
ENST00000396610 (CMC1-006) 28263112-28319741 retained_intron
ENST00000418849 (CMC1-009) 28253728-28319773 protein_coding
ENST00000423894 (CMC1-004) 28241618-28319771 protein_coding
ENST00000466830 (CMC1-002) 28241595-28325142 protein_coding
ENST00000467644 (CMC1-010) 28297101-28319773 processed_transcript
ENST00000468330 (CMC1-007) 28291801-28316407 processed_transcript
ENST00000469102 (CMC1-003) 28315901-28319773 processed_transcript
ENST00000477739 (CMC1-001) 28241584-28319762 retained_intron
ENST00000482499 (CMC1-011) 28316353-28319776 processed_transcript
ENST00000495428 (CMC1-008) 28291848-28319770 processed_transcript
ENSG00000225548 (AC098973.2)
 ENST00000414382 (AC098973.2-002) 27821488-27891301 lincRNA
ENST00000425195 (AC098973.2-001) 27802762-27860325 lincRNA
ENST00000455984 (AC098973.2-003) 27821598-27860192 lincRNA
ENSG00000229243 (AC098973.1)
 ENST00000432163 (AC098973.1-001) 27830888-27834136 lincRNA
ENSG00000232766 (AC098614.3)
 ENST00000438957 (AC098614.3-001) 27703129-27703568 processed_pseudogene
ENSG00000235493 (AC092415.1)
 ENST00000356047 (AC092415.1-002) 27997210-28028604 lincRNA
ENST00000437506 (AC092415.1-001) 27997544-28028603 lincRNA
ENSG00000272282 (RP11-222K16.2)
 ENST00000606069 (RP11-222K16.2-001) 27712910-27714005 lincRNA
CIL_0008L2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1557 VISTA 10090 9:118017970-118619794
GeneTranscriptPositionBiotype
ENSMUSG00000032443 (Zcwpw2)
zinc finger, CW type with PWWP domain 2 		ENSMUST00000111769 (Zcwpw2-006) 117876000-118013998 processed_transcript
ENSMUST00000187329 (Zcwpw2-003) 118012821-118040259 processed_transcript
ENSMUST00000187803 (Zcwpw2-001) 117964491-118014160 transcribed_unprocessed_pseudogene
ENSMUST00000191100 (Zcwpw2-002) 117911996-118014160 processed_transcript
ENSMUSG00000032446 (Eomes)
eomesodermin homolog (Xenopus laevis) 		ENSMUST00000035020 (Eomes-001) 118478344-118486132 protein_coding
ENSMUST00000111763 (Eomes-003) 118478212-118485366 protein_coding
ENSMUST00000150633 (Eomes-002) 118478861-118482757 protein_coding
ENSMUSG00000038708 (Golga4)
golgi autoantigen, golgin subfamily a, 4 		ENSMUST00000084820 (Golga4-201) 118506318-118582522 protein_coding
ENSMUSG00000039115 (Itga9)
integrin alpha 9 		ENSMUST00000044165 (Itga9-001) 118606690-118901003 protein_coding
ENSMUST00000124360 (Itga9-002) 118711657-118897723 protein_coding
ENSMUST00000124422 (Itga9-005) 118839628-118871940 processed_transcript
ENSMUST00000125021 (Itga9-003) 118685835-118807231 processed_transcript
ENSMUST00000149150 (Itga9-004) 118807284-118843848 protein_coding
ENSMUST00000155437 (Itga9-006) 118872069-118897312 processed_transcript
ENSMUSG00000039163 (Cmc1)
COX assembly mitochondrial protein 1 		ENSMUST00000044220 (Cmc1-201) 118064529-118150196 protein_coding
ENSMUSG00000039285 (Azi2)
5-azacytidine induced gene 2 		ENSMUST00000044454 (Azi2-001) 118040499-118063839 protein_coding
ENSMUST00000123690 (Azi2-010) 118059056-118062260 protein_coding
ENSMUST00000127189 (Azi2-007) 118049376-118051659 retained_intron
ENSMUST00000130735 (Azi2-009) 118049315-118062489 protein_coding
ENSMUST00000133580 (Azi2-002) 118040557-118062739 protein_coding
ENSMUST00000133814 (Azi2-008) 118055504-118061786 retained_intron
ENSMUST00000134433 (Azi2-003) 118040579-118060484 protein_coding
ENSMUST00000135251 (Azi2-006) 118050887-118061884 protein_coding
ENSMUST00000143024 (Azi2-005) 118040687-118050220 retained_intron
ENSMUST00000154583 (Azi2-004) 118040616-118069794 nonsense_mediated_decay
ENSMUSG00000097402 (Gm17399)
predicted gene, 17399 		ENSMUST00000181824 (Gm17399-201) 118150231-118170376 lincRNA
ENSMUSG00000098161 (Gm26975)
predicted gene, 26975 		ENSMUST00000182885 (Gm26975-001) 118404097-118406099 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008L2_0001ENSG00000163508ENST00000295743ENST00000449599ENST00000461503ENSG00000187118ENST00000334841ENST00000396610ENST00000418849ENST00000423894ENST00000466830ENST00000467644ENST00000468330ENST00000469102ENST00000477739ENST00000482499ENST00000495428ENSG00000225548ENST00000414382ENST00000425195ENST00000455984ENSG00000229243ENST00000432163ENSG00000232766ENST00000438957ENSG00000235493ENST00000356047ENST00000437506ENSG00000272282ENST00000606069CIL_0008L2_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008L2_0001ENSG00000163508ENST00000295743ENST00000449599ENST00000461503ENSG00000187118ENST00000334841ENST00000418849ENST00000423894ENST00000477739ENSG00000225548ENST00000414382ENST00000425195ENST00000455984ENSG00000229243ENST00000432163ENSG00000232766ENST00000438957ENSG00000235493ENST00000356047ENSG00000272282ENST00000606069CIL_0008L2_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163508 ENST00000295743 0.038±0.00 0.674±0.00 0.108±0.00 0.023±0.00 0.032±0.00 N/A 0.027±0.00 N/A 0.068±0.00 1.454±0.00 N/A 0.079±0.00 0.126±0.07 0.261±0.06
ENST00000449599 N/A N/A N/A N/A 0.214±0.00 0.061±0.00 0.042±0.00 0.076±0.00 0.117±0.08 0.184±0.09 0.033±0.00 0.077±0.04 0.055±0.00 N/A
ENST00000461503 0.064±0.00 N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187118 ENST00000334841 N/A N/A N/A N/A N/A N/A 12.551±0.00 N/A N/A N/A N/A N/A 10.569±0.00 18.513±0.00
ENST00000396610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418849 N/A N/A N/A N/A N/A N/A N/A 8.540±0.00 N/A N/A N/A N/A N/A N/A
ENST00000423894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.630±1.50 N/A
ENST00000466830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477739 N/A N/A N/A N/A 2.124±0.00 N/A N/A N/A N/A 1.715±0.00 N/A 1.271±0.00 N/A N/A
ENST00000482499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225548 ENST00000414382 N/A N/A 1.178±0.00 N/A 0.095±0.00 N/A N/A N/A N/A 0.449±0.00 N/A 0.379±0.00 N/A N/A
ENST00000425195 N/A N/A N/A N/A N/A N/A 0.114±0.00 0.168±0.00 N/A N/A N/A 0.082±0.00 0.086±0.02 0.560±0.00
ENST00000455984 N/A N/A N/A N/A 0.087±0.00 N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000229243 ENST00000432163 N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A 0.167±0.00
ENSG00000232766 ENST00000438957 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.01
ENSG00000235493 ENST00000356047 0.329±0.00 0.564±0.00 0.299±0.00 0.633±0.08 0.577±0.10 0.864±0.70 0.677±0.38 0.470±0.26 0.586±0.44 0.670±0.49 0.135±0.10 0.455±0.38 0.133±0.05 0.472±0.04
ENST00000437506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272282 ENST00000606069 N/A 1.063±0.00 N/A N/A 0.073±0.00 0.034±0.00 0.017±0.00 0.075±0.00 0.016±0.00 0.470±0.17 N/A 0.075±0.04 0.083±0.04 0.332±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032443 ENSMUST00000111769 0.096±0.03 0.098±0.02 0.152±0.00 0.684±0.39 0.128±0.06 0.075±0.03 0.035±0.02 0.072±0.03 0.022±0.01 0.112±0.02 0.049±0.03 0.298±0.12 0.091±0.10 1.895±1.15
ENSMUST00000187329 N/A N/A N/A 0.193±0.00 0.070±0.00 N/A 0.023±0.00 0.086±0.05 0.038±0.02 0.066±0.00 0.029±0.01 0.167±0.04 0.027±0.00 0.627±0.19
ENSMUST00000187803 N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A 0.158±0.00 N/A
ENSMUST00000191100 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A 0.201±0.20 N/A 0.075±0.00 N/A 0.193±0.04 N/A
ENSMUSG00000032446 ENSMUST00000035020 0.288±0.04 N/A 0.060±0.02 4.447±4.30 0.501±0.26 0.031±0.01 0.025±0.00 0.111±0.03 0.038±0.02 0.282±0.10 0.045±0.03 0.078±0.05 1.762±2.19 0.038±0.01
ENSMUST00000111763 0.191±0.14 0.060±0.03 0.023±0.01 1.540±1.49 0.431±0.14 0.052±0.01 0.088±0.04 0.062±0.06 0.011±0.01 0.125±0.06 N/A 0.110±0.06 0.179±0.01 0.042±0.02
ENSMUST00000150633 0.169±0.19 0.047±0.03 0.018±0.00 N/A 1.894±0.04 0.051±0.02 0.035±0.00 0.029±0.02 0.014±0.00 0.170±0.04 N/A 0.048±0.03 N/A 0.022±0.00
ENSMUSG00000038708 ENSMUST00000084820 2.373±1.24 3.403±0.67 7.250±1.46 12.123±11.08 1.636±0.52 3.502±1.14 6.429±0.63 6.259±0.53 3.002±1.51 3.934±1.84 47.800±4.57 6.783±10.84 16.919±10.60 10.971±1.34
ENSMUSG00000039115 ENSMUST00000044165 3.720±1.83 22.876±3.31 13.518±1.43 1.084±0.38 2.867±0.81 6.292±0.56 8.676±0.22 4.223±0.16 2.312±0.58 17.353±1.04 0.700±0.11 22.201±2.91 2.811±1.06 0.555±0.05
ENSMUST00000124360 N/A N/A N/A N/A N/A N/A N/A N/A 0.839±0.00 N/A N/A N/A 3.128±1.46 0.512±0.04
ENSMUST00000124422 N/A 39.392±0.00 N/A N/A 5.091±1.16 N/A N/A N/A N/A N/A N/A N/A N/A 1.882±0.41
ENSMUST00000125021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039163 ENSMUST00000044220 3.528±0.46 7.605±2.67 12.827±0.16 6.537±1.40 2.588±0.81 2.826±0.46 3.407±0.22 5.053±1.34 4.719±1.80 2.740±0.43 6.260±1.38 6.235±6.14 6.222±1.22 1.449±0.71
ENSMUSG00000039285 ENSMUST00000044454 7.408±1.51 21.317±14.77 12.032±0.73 8.282±2.91 8.079±1.09 20.919±6.42 4.931±0.93 9.673±2.19 6.473±2.37 12.434±4.13 1.577±0.85 12.398±6.60 7.149±3.77 12.247±2.69
ENSMUST00000123690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127189 N/A N/A N/A 73.930±0.00 N/A N/A N/A N/A N/A N/A N/A 90.407±0.00 54.271±15.68 151.271±0.00
ENSMUST00000130735 N/A N/A N/A 7.156±0.00 N/A N/A 4.958±0.00 N/A 4.028±0.00 N/A 3.591±0.63 N/A 7.924±1.99 10.693±1.16
ENSMUST00000133580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134433 3.528±0.00 N/A N/A 3.895±0.00 3.225±0.00 4.246±0.00 N/A N/A 2.648±0.33 3.213±0.36 N/A 4.994±1.03 3.364±0.00 5.990±0.89
ENSMUST00000135251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.029±0.00
ENSMUST00000143024 N/A N/A N/A 35.986±0.00 N/A N/A N/A N/A N/A N/A N/A 47.160±0.00 39.142±10.50 39.968±0.00
ENSMUST00000154583 N/A N/A N/A N/A 3.846±0.00 N/A 2.476±0.06 3.455±0.31 2.931±0.55 N/A 3.825±0.54 N/A 4.879±0.67 N/A
ENSMUSG00000097402 ENSMUST00000181824 0.144±0.07 0.206±0.12 0.386±0.16 0.831±0.07 0.218±0.11 0.099±0.03 0.073±0.03 0.183±0.07 0.222±0.15 0.111±0.05 0.166±0.10 0.325±0.19 0.098±0.04 0.583±0.38
ENSMUSG00000098161 ENSMUST00000182885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.08 0.377±0.00

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