C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidic acid receptor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044405 Lpar6-001 ENSMUSG00000033446 10090 + 14:73237895-73243294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044405 9.331±0.83 2.704±0.43 5.013±0.81 1.188±0.69 10.579±1.02 3.700±0.60 1.705±0.16 2.853±0.55 3.685±1.04 3.024±0.27 0.430±0.09 4.015±1.81 1.998±1.08 0.208±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078H CIL_00078H_0003 CGP 14:73183673-73325822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345941 LPAR6-001 protein_coding Homo_sapiens 0 1206
ENST00000378434 LPAR6-003 protein_coding Homo_sapiens 0 1206
ENST00000477571 SLC37A3-006 nonsense_mediated_decay Homo_sapiens 0.00000000000008 84
ENST00000482024 LPAR6-002 processed_transcript Homo_sapiens 0 612
ENST00000620633 LPAR6-201 protein_coding Homo_sapiens 0 1206

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