C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044660 Armc5-201 ENSMUSG00000042178 10090 + 7:128237357-128245100 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044660 10.332±1.60 23.846±2.30 10.646±0.37 4.785±2.00 14.020±4.25 13.357±2.31 3.976±0.23 13.912±1.75 4.853±1.15 17.749±1.55 3.087±0.29 18.380±7.50 4.356±0.69 5.538±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035P CIL_00035P_0002 CGP 7:128237357-128253712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268314 ARMC5-201 protein_coding Homo_sapiens 0 2667
ENST00000408912 ARMC5-001 protein_coding Homo_sapiens 0 2654
ENST00000457010 ARMC5-002 protein_coding Homo_sapiens 0 1729
ENST00000538189 ARMC5-202 protein_coding Homo_sapiens 0 2311
ENST00000563544 ARMC5-003 protein_coding Homo_sapiens 0 2656
ENST00000564900 ARMC5-004 protein_coding Homo_sapiens 0 1375

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