C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408912 ARMC5-001 ENSG00000140691 9606 + 16:31458080-31467105 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverLungMuscleOvaryPlacentaENST00000408912
Transcript ID Adrenal Brain Heart Liver Lung Muscle Ovary Placenta
ENST00000408912 2.635±0.00 1.551±0.00 0.764±0.00 1.097±0.00 1.985±0.00 2.720±0.79 1.162±0.00 1.009±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0001 VISTA 16:31421736-32023283
CIL_00035P CIL_00035P_0001 CGP 16:31458080-31477960

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044660 Armc5-201 protein_coding Mus_musculus 0 2654
ENSDART00000104906 si:ch73-367f21.4-201 protein_coding Danio_rerio 0.000005 58
ENSDART00000151389 si:ch73-367f21.4-001 protein_coding Danio_rerio 0.000005 58

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