C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 6 interacting protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044681 Arl6ip5-001 ENSMUSG00000035199 10090 + 6:97210689-97233315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044681
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044681 48.076±3.67 41.303±3.15 55.316±20.48 39.957±26.98 46.148±8.41 33.983±3.94 40.315±12.02 32.072±1.17 19.334±3.30 47.702±1.17 41.307±9.85 43.818±13.17 49.726±7.62 3.508±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034O CIL_00034O_0002 CGP 6:97183670-97233315
CIL_0003AZ CIL_0003AZ_0002 CGP 6:97210689-97252780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005856 IEA cytoskeleton
GO:0008022 IEA protein C-terminus binding
GO:0008631 IEA intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0010917 IEA negative regulation of mitochondrial membrane potential
GO:0015813 IDA L-glutamate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032874 IEA positive regulation of stress-activated MAPK cascade
GO:0043065 IEA positive regulation of apoptotic process
GO:0043280 IEA positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0051051 IEA negative regulation of transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273258 ARL6IP5-001 protein_coding Homo_sapiens 0 743
ENST00000470936 ARL6IP5-005 retained_intron Homo_sapiens 0 499
ENST00000478935 ARL6IP5-002 protein_coding Homo_sapiens 0 296
ENST00000484921 ARL6IP5-006 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000485444 ARL6IP5-004 nonsense_mediated_decay Homo_sapiens 0 255

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