C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger SWIM-type containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044823 Zswim5-001 ENSMUSG00000033948 10090 + 4:116877376-116989264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044823
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044823 0.155±0.13 1.513±0.32 0.332±0.25 7.393±4.27 0.233±0.11 1.775±0.11 0.354±0.09 2.372±0.93 0.316±0.25 1.060±0.25 0.031±0.01 1.562±0.57 0.206±0.08 1.502±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PR CIL_0001PR_0002 CGP 4:116877376-116994413

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IEA extracellular space
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000078305 zswim5-001 protein_coding Danio_rerio 0 1718
ENST00000359600 ZSWIM5-001 protein_coding Homo_sapiens 0 5437
ENST00000420212 ZSWIM5P2-001 unprocessed_pseudogene Homo_sapiens 0 1074
ENST00000420606 ZSWIM5P1-001 processed_pseudogene Homo_sapiens 0 2025
ENST00000511265 ZSWIM5P3-001 processed_pseudogene Homo_sapiens 0 1664

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