C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001PR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055900-ENSDARG00000006818 CGP 7955 2:27639236-27723973
GeneTranscriptPositionBiotype
ENSDARG00000006818 (urod)
uroporphyrinogen decarboxylase 		ENSDART00000014568 (urod-001) 27704338-27723973 protein_coding
ENSDARG00000055900 (zswim5)
zinc finger, SWIM-type containing 5 		ENSDART00000078305 (zswim5-001) 27639236-27692112 protein_coding
CIL_0001PR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033948-ENSMUSG00000028684 CGP 10090 4:116877376-116994413
GeneTranscriptPositionBiotype
ENSMUSG00000028684 (Urod)
uroporphyrinogen decarboxylase 		ENSMUST00000030446 (Urod-001) 116989965-116994413 protein_coding
ENSMUST00000123079 (Urod-007) 116992284-116994346 retained_intron
ENSMUST00000127635 (Urod-005) 116992784-116994345 retained_intron
ENSMUST00000130273 (Urod-011) 116991461-116994357 protein_coding
ENSMUST00000134598 (Urod-009) 116990217-116991665 retained_intron
ENSMUST00000135164 (Urod-006) 116991076-116994364 retained_intron
ENSMUST00000139209 (Urod-003) 116993108-116994340 retained_intron
ENSMUST00000139816 (Urod-002) 116993280-116994380 retained_intron
ENSMUST00000150370 (Urod-008) 116990285-116991886 retained_intron
ENSMUST00000153629 (Urod-010) 116992953-116993597 processed_transcript
ENSMUSG00000033948 (Zswim5)
zinc finger SWIM-type containing 5 		ENSMUST00000044823 (Zswim5-001) 116877376-116989264 protein_coding
ENSMUSG00000082207 (Gm12998)
predicted gene 12998 		ENSMUST00000122445 (Gm12998-001) 116945732-116946534 processed_pseudogene
ENSMUSG00000088902 (Gm25435)
predicted gene, 25435 		ENSMUST00000158277 (Gm25435-201) 116915227-116915493 misc_RNA
ENSMUSG00000095805 (Gm22092)
predicted gene, 22092 		ENSMUST00000178290 (Gm22092-201) 116922384-116922490 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PR_0001ENSDARG00000006818ENSDART00000014568ENSDARG00000055900ENSDART00000078305CIL_0001PR_0002ENSMUSG00000028684ENSMUST00000030446ENSMUST00000123079ENSMUST00000127635ENSMUST00000130273ENSMUST00000134598ENSMUST00000135164ENSMUST00000139209ENSMUST00000139816ENSMUST00000150370ENSMUST00000153629ENSMUSG00000033948ENSMUST00000044823ENSMUSG00000082207ENSMUST00000122445ENSMUSG00000088902ENSMUST00000158277ENSMUSG00000095805ENSMUST00000178290
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PR_0001ENSDARG00000006818ENSDART00000014568ENSDARG00000055900ENSDART00000078305CIL_0001PR_0002ENSMUSG00000028684ENSMUST00000030446ENSMUST00000127635ENSMUST00000130273ENSMUST00000150370ENSMUSG00000033948ENSMUST00000044823ENSMUSG00000082207ENSMUST00000122445ENSMUSG00000088902ENSMUST00000158277ENSMUSG00000095805ENSMUST00000178290
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006818 ENSDART00000014568 N/A N/A N/A 2.610±1.55 N/A N/A 3.726±0.63 12.616±0.00 0.490±0.00 N/A 2.424±0.00 N/A N/A N/A
ENSDARG00000055900 ENSDART00000078305 N/A N/A N/A 10.578±3.80 N/A N/A 3.919±1.34 4.506±2.20 0.757±0.00 N/A 2.530±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028684 ENSMUST00000030446 27.639±5.79 36.839±1.70 7.055±0.79 10.545±1.40 18.605±9.92 11.106±3.38 13.633±5.17 15.416±3.44 71.536±76.79 15.931±5.45 16.940±2.17 25.807±12.12 21.376±9.32 4.615±1.89
ENSMUST00000123079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127635 N/A N/A N/A 38.614±0.00 16.763±1.24 11.486±0.00 N/A N/A 24.467±0.00 N/A 12.645±2.64 37.684±6.22 31.004±5.32 3.044±0.00
ENSMUST00000130273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.364±0.00 31.833±0.00 7.525±0.00
ENSMUST00000134598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150370 N/A N/A N/A 54.811±0.00 N/A N/A 16.559±0.00 N/A N/A N/A N/A 75.026±0.00 47.937±17.81 10.362±0.00
ENSMUST00000153629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033948 ENSMUST00000044823 0.155±0.13 1.513±0.32 0.332±0.25 7.393±4.27 0.233±0.11 1.775±0.11 0.354±0.09 2.372±0.93 0.316±0.25 1.060±0.25 0.031±0.01 1.562±0.57 0.206±0.08 1.502±0.44
ENSMUSG00000082207 ENSMUST00000122445 N/A 0.460±0.12 0.032±0.00 0.128±0.01 N/A N/A N/A N/A 0.016±0.01 N/A N/A N/A 0.008±0.00 0.067±0.01
ENSMUSG00000088902 ENSMUST00000158277 N/A N/A N/A 0.287±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.00
ENSMUSG00000095805 ENSMUST00000178290 N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A 11.034±0.00 N/A N/A N/A N/A N/A

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