C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044857 Trappc5-001 ENSMUSG00000040236 10090 + 8:3676299-3681255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044857
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044857 18.841±1.15 22.586±2.86 13.590±1.57 18.984±5.25 21.880±6.91 19.438±3.83 10.743±0.94 16.987±1.05 13.075±1.15 18.216±1.71 9.436±2.76 20.811±6.92 12.895±3.39 6.891±2.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AR CIL_0005AR_0002 CGP 8:3676299-3694174

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016192 IEA vesicle-mediated transport
GO:0030008 IDA TRAPP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317378 TRAPPC5-002 protein_coding Homo_sapiens 0 730
ENST00000426877 TRAPPC5-003 protein_coding Homo_sapiens 0 730
ENST00000595985 TRAPPC5-004 protein_coding Homo_sapiens 0 416
ENST00000596148 TRAPPC5-001 protein_coding Homo_sapiens 0 741
ENST00000597959 CTD-3214H19.16-001 protein_coding Homo_sapiens 0 730

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